BLASTX nr result
ID: Coptis23_contig00035712
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00035712 (269 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002300943.1| predicted protein [Populus trichocarpa] gi|2... 121 7e-26 ref|XP_002265695.1| PREDICTED: psbP domain-containing protein 4,... 120 9e-26 ref|XP_003523403.1| PREDICTED: psbP domain-containing protein 4,... 120 2e-25 gb|ACU23933.1| unknown [Glycine max] 120 2e-25 ref|XP_003526671.1| PREDICTED: psbP domain-containing protein 4,... 119 2e-25 >ref|XP_002300943.1| predicted protein [Populus trichocarpa] gi|222842669|gb|EEE80216.1| predicted protein [Populus trichocarpa] Length = 276 Score = 121 bits (303), Expect = 7e-26 Identities = 54/58 (93%), Positives = 56/58 (96%) Frame = -1 Query: 176 GWRTYRRPDEKSGGHGVGWSPIIPYSFSVPQGWEEVPVSIADLGGTEIDLRFASSQEG 3 GWRTYRRPD+KSGGHGVGWSPIIPY FSVPQGWEEVPVSIADLGGTEIDLRF SS+EG Sbjct: 108 GWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQGWEEVPVSIADLGGTEIDLRFGSSKEG 165 >ref|XP_002265695.1| PREDICTED: psbP domain-containing protein 4, chloroplastic [Vitis vinifera] gi|302142754|emb|CBI19957.3| unnamed protein product [Vitis vinifera] Length = 279 Score = 120 bits (302), Expect = 9e-26 Identities = 54/58 (93%), Positives = 56/58 (96%) Frame = -1 Query: 176 GWRTYRRPDEKSGGHGVGWSPIIPYSFSVPQGWEEVPVSIADLGGTEIDLRFASSQEG 3 GWRTYRRPDEKSGGHGVGWSPIIPY FSVP GWEEVPVSIADLGGTEIDLRFA+S+EG Sbjct: 111 GWRTYRRPDEKSGGHGVGWSPIIPYIFSVPSGWEEVPVSIADLGGTEIDLRFANSKEG 168 >ref|XP_003523403.1| PREDICTED: psbP domain-containing protein 4, chloroplastic-like [Glycine max] Length = 267 Score = 120 bits (300), Expect = 2e-25 Identities = 54/58 (93%), Positives = 56/58 (96%) Frame = -1 Query: 176 GWRTYRRPDEKSGGHGVGWSPIIPYSFSVPQGWEEVPVSIADLGGTEIDLRFASSQEG 3 GWRTYRRPDEKSGGHGVGWSPIIPYSF VP+ WEEVPVSIADLGGTEIDLRFASS+EG Sbjct: 99 GWRTYRRPDEKSGGHGVGWSPIIPYSFRVPEEWEEVPVSIADLGGTEIDLRFASSKEG 156 >gb|ACU23933.1| unknown [Glycine max] Length = 267 Score = 120 bits (300), Expect = 2e-25 Identities = 54/58 (93%), Positives = 56/58 (96%) Frame = -1 Query: 176 GWRTYRRPDEKSGGHGVGWSPIIPYSFSVPQGWEEVPVSIADLGGTEIDLRFASSQEG 3 GWRTYRRPDEKSGGHGVGWSPIIPYSF VP+ WEEVPVSIADLGGTEIDLRFASS+EG Sbjct: 99 GWRTYRRPDEKSGGHGVGWSPIIPYSFRVPEEWEEVPVSIADLGGTEIDLRFASSKEG 156 >ref|XP_003526671.1| PREDICTED: psbP domain-containing protein 4, chloroplastic-like [Glycine max] Length = 271 Score = 119 bits (299), Expect = 2e-25 Identities = 54/58 (93%), Positives = 56/58 (96%) Frame = -1 Query: 176 GWRTYRRPDEKSGGHGVGWSPIIPYSFSVPQGWEEVPVSIADLGGTEIDLRFASSQEG 3 GWRTYRRPDEKSGGHGVGWSPIIPYSF VP+ WEEVPVSIADLGGTEIDLRFASS+EG Sbjct: 103 GWRTYRRPDEKSGGHGVGWSPIIPYSFRVPKEWEEVPVSIADLGGTEIDLRFASSKEG 160