BLASTX nr result

ID: Coptis23_contig00035707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035707
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524717.1| ccd1, putative [Ricinus communis] gi|2235360...   135   5e-30
ref|XP_002305624.1| predicted protein [Populus trichocarpa] gi|2...   134   7e-30
ref|XP_002263028.1| PREDICTED: calcium-binding protein PBP1 [Vit...   134   9e-30
ref|XP_002317260.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_002284268.1| PREDICTED: calcium-binding protein PBP1 [Vit...   133   2e-29

>ref|XP_002524717.1| ccd1, putative [Ricinus communis] gi|223536078|gb|EEF37736.1| ccd1,
           putative [Ricinus communis]
          Length = 113

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/105 (59%), Positives = 83/105 (79%)
 Frame = -1

Query: 454 METQNVAMFQDFFPSMIERLGAEGFLRELCNGFQLLVDNDKGLITFESLKRNSSXXXXXX 275
           M +++  +F+DFFP+M+E+LGA+GF++ELCNGF+LL+D +KG+ITFESLKRN++      
Sbjct: 1   MASRDGVIFEDFFPAMVEKLGADGFMKELCNGFRLLMDREKGVITFESLKRNANLLGLQD 60

Query: 274 XXXXXLMCMLREGDMDGDGALNQKEFCILMLKLSPGLRNGSRKSL 140
                +MCMLREGD+DGDGALN+ EFC LM +LSPGL   SRK L
Sbjct: 61  MSDDEVMCMLREGDLDGDGALNEMEFCTLMFRLSPGLMRTSRKWL 105


>ref|XP_002305624.1| predicted protein [Populus trichocarpa] gi|222848588|gb|EEE86135.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score =  134 bits (338), Expect = 7e-30
 Identities = 65/105 (61%), Positives = 79/105 (75%)
 Frame = -1

Query: 454 METQNVAMFQDFFPSMIERLGAEGFLRELCNGFQLLVDNDKGLITFESLKRNSSXXXXXX 275
           M +++  +F+DFFPSM+++LGAEGF++EL NGFQLLVD DKGLITFESLKRNS       
Sbjct: 1   MASRSGIVFEDFFPSMVDKLGAEGFMKELSNGFQLLVDEDKGLITFESLKRNSKLLGFQD 60

Query: 274 XXXXXLMCMLREGDMDGDGALNQKEFCILMLKLSPGLRNGSRKSL 140
                  CMLREGD+DGDGALN+ EFC LM +LSPGL   S+K L
Sbjct: 61  MTDDEARCMLREGDLDGDGALNEMEFCTLMFRLSPGLMMNSKKWL 105


>ref|XP_002263028.1| PREDICTED: calcium-binding protein PBP1 [Vitis vinifera]
           gi|147788102|emb|CAN67069.1| hypothetical protein
           VITISV_015161 [Vitis vinifera]
          Length = 113

 Score =  134 bits (337), Expect = 9e-30
 Identities = 64/107 (59%), Positives = 82/107 (76%)
 Frame = -1

Query: 454 METQNVAMFQDFFPSMIERLGAEGFLRELCNGFQLLVDNDKGLITFESLKRNSSXXXXXX 275
           M ++N  +F+DFFP+M+ERLGA+GF+ ELCNGF+LL+D DKG+ITFESLKRNS+      
Sbjct: 1   MASRNGVVFEDFFPAMVERLGADGFMTELCNGFRLLMDGDKGVITFESLKRNSATLGLQN 60

Query: 274 XXXXXLMCMLREGDMDGDGALNQKEFCILMLKLSPGLRNGSRKSLDD 134
                L  M+ EGD+DGDGALNQ EFCILM +LSPGL   SR+ L++
Sbjct: 61  LSDDELRSMVTEGDLDGDGALNQMEFCILMFRLSPGLMTSSRRWLEE 107


>ref|XP_002317260.1| predicted protein [Populus trichocarpa] gi|222860325|gb|EEE97872.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/105 (60%), Positives = 80/105 (76%)
 Frame = -1

Query: 454 METQNVAMFQDFFPSMIERLGAEGFLRELCNGFQLLVDNDKGLITFESLKRNSSXXXXXX 275
           M ++N  +F+DFFP+M+E+LGAEGF++EL NGFQLLVD DKGLITFESLKRNS+      
Sbjct: 1   MASRNGIVFEDFFPAMVEKLGAEGFMKELSNGFQLLVDEDKGLITFESLKRNSALLGLQD 60

Query: 274 XXXXXLMCMLREGDMDGDGALNQKEFCILMLKLSPGLRNGSRKSL 140
                + CM+REGD+DGDGALN+ EFC LM +LSPGL   S + L
Sbjct: 61  MSDDEVKCMVREGDLDGDGALNEMEFCTLMFRLSPGLMMNSTEWL 105


>ref|XP_002284268.1| PREDICTED: calcium-binding protein PBP1 [Vitis vinifera]
          Length = 110

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/107 (59%), Positives = 81/107 (75%)
 Frame = -1

Query: 454 METQNVAMFQDFFPSMIERLGAEGFLRELCNGFQLLVDNDKGLITFESLKRNSSXXXXXX 275
           ME +    F+D+FPSMIERLGAEGF+ ELCNGF LL+D +KGLITFESL+RN+       
Sbjct: 1   MEVEGGVQFEDYFPSMIERLGAEGFIVELCNGFHLLMDVEKGLITFESLRRNTILLGLQD 60

Query: 274 XXXXXLMCMLREGDMDGDGALNQKEFCILMLKLSPGLRNGSRKSLDD 134
                L+CML EGD+DGDGALNQ EFCILM +LSPGL +G ++ +++
Sbjct: 61  MGDDELVCMLSEGDLDGDGALNQMEFCILMFRLSPGLMDGPKQWVEE 107


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