BLASTX nr result

ID: Coptis23_contig00035690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035690
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272921.1| PREDICTED: uncharacterized protein LOC100245...   125   5e-27
gb|ABF18894.1| SNI1 [Solanum tuberosum]                               112   2e-23
gb|ABF00136.1| SNI1 [Solanum tuberosum]                               112   2e-23
ref|XP_003571251.1| PREDICTED: uncharacterized protein LOC100842...   108   6e-22
ref|XP_002453415.1| hypothetical protein SORBIDRAFT_04g005660 [S...   108   6e-22

>ref|XP_002272921.1| PREDICTED: uncharacterized protein LOC100245146 [Vitis vinifera]
           gi|297740458|emb|CBI30640.3| unnamed protein product
           [Vitis vinifera]
          Length = 474

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/99 (64%), Positives = 78/99 (78%)
 Frame = +1

Query: 37  MEVKKNTRSRNNGIEENTMAILDSSGIKDSKDLLDDRLAFLEAVRASSLVSESGSAPSSK 216
           ME    +RS    IEENTMAI+D++G KD++D  DDR+AFLEAVRASS+V E+G+AP++K
Sbjct: 1   MESSSRSRSHAGSIEENTMAIIDAAGAKDTQDTNDDRMAFLEAVRASSIVPETGTAPTNK 60

Query: 217 MFEAIFHILKDSTSLELTMTSYQLLIELDKRFPRVYISH 333
           MFEAIF ILK   SLEL M SYQLL ELDK FPR Y+S+
Sbjct: 61  MFEAIFQILKVGKSLELIMASYQLLNELDKCFPRAYLSN 99


>gb|ABF18894.1| SNI1 [Solanum tuberosum]
          Length = 475

 Score =  112 bits (281), Expect = 2e-23
 Identities = 63/96 (65%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
 Frame = +1

Query: 37  MEVKKNTRSRNNGIEENTMAILDSSGI-KDSKDLLDDRLAFLEAVRASSLVSESGSAPSS 213
           M  +K   S N GIEENTMAILD+SG  +DS    DD LAFLEAVR++SL+ E+G+ P+S
Sbjct: 1   MAKRKRGGSNNGGIEENTMAILDTSGFNRDSHHRHDDSLAFLEAVRSASLLPENGTPPTS 60

Query: 214 KMFEAIFHILKDSTSLELTMTSYQLLIELDKRFPRV 321
            M EAIF ILK+ TSLEL M SYQLL ELDKRFPRV
Sbjct: 61  TMREAIFQILKEETSLELIMGSYQLLNELDKRFPRV 96


>gb|ABF00136.1| SNI1 [Solanum tuberosum]
          Length = 475

 Score =  112 bits (281), Expect = 2e-23
 Identities = 63/96 (65%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
 Frame = +1

Query: 37  MEVKKNTRSRNNGIEENTMAILDSSGI-KDSKDLLDDRLAFLEAVRASSLVSESGSAPSS 213
           M  +K   S N GIEENTMAILD+SG  +DS    DD LAFLEAVR++SL+ E+G+ P+S
Sbjct: 1   MAKRKRGGSNNGGIEENTMAILDTSGFNRDSHHRHDDSLAFLEAVRSASLLPENGTPPTS 60

Query: 214 KMFEAIFHILKDSTSLELTMTSYQLLIELDKRFPRV 321
            M EAIF ILK+ TSLEL M SYQLL ELDKRFPRV
Sbjct: 61  TMREAIFQILKEETSLELIMGSYQLLNELDKRFPRV 96


>ref|XP_003571251.1| PREDICTED: uncharacterized protein LOC100842963 [Brachypodium
           distachyon]
          Length = 464

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/90 (57%), Positives = 72/90 (80%)
 Frame = +1

Query: 67  NNGIEENTMAILDSSGIKDSKDLLDDRLAFLEAVRASSLVSESGSAPSSKMFEAIFHILK 246
           + GIEEN MAILD+ G+KDS+DL DDR AFLEAVR+  L  +  S+PS +M+ A+F IL+
Sbjct: 13  DGGIEENAMAILDTFGVKDSRDLHDDRAAFLEAVRSGCLSGDKPSSPSWRMYNAVFQILQ 72

Query: 247 DSTSLELTMTSYQLLIELDKRFPRVYISHS 336
            S+SLELT+ S+ LL+EL K++PRVY+++S
Sbjct: 73  SSSSLELTIASFHLLMELGKQYPRVYLTNS 102


>ref|XP_002453415.1| hypothetical protein SORBIDRAFT_04g005660 [Sorghum bicolor]
           gi|241933246|gb|EES06391.1| hypothetical protein
           SORBIDRAFT_04g005660 [Sorghum bicolor]
          Length = 473

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/90 (57%), Positives = 71/90 (78%)
 Frame = +1

Query: 67  NNGIEENTMAILDSSGIKDSKDLLDDRLAFLEAVRASSLVSESGSAPSSKMFEAIFHILK 246
           + GIEEN MAILDSSGIKDS+DL DDR AFLEAVR++ L +++ SAPS +M++ +F I +
Sbjct: 16  DGGIEENAMAILDSSGIKDSRDLHDDRAAFLEAVRSACLAADNPSAPSWRMYDGVFQIFR 75

Query: 247 DSTSLELTMTSYQLLIELDKRFPRVYISHS 336
           +S SLEL + S+ LL EL K++PR Y++ S
Sbjct: 76  NSRSLELAVASFHLLTELGKQYPRTYVTDS 105


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