BLASTX nr result

ID: Coptis23_contig00035679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035679
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28687.3| unnamed protein product [Vitis vinifera]              147   9e-34
ref|XP_002512605.1| conserved hypothetical protein [Ricinus comm...   137   9e-31
emb|CBI35970.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_002280107.1| PREDICTED: inactive protein kinase SELMODRAF...   121   7e-26
ref|XP_004172691.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine-pro...   120   1e-25

>emb|CBI28687.3| unnamed protein product [Vitis vinifera]
          Length = 736

 Score =  147 bits (371), Expect = 9e-34
 Identities = 79/111 (71%), Positives = 85/111 (76%), Gaps = 1/111 (0%)
 Frame = -3

Query: 332 QSRQLIVNKQASKDWNRHTAPLSP-SSPIDRTSSIRRAMSISIKQPPTPPPLCSVCKYNA 156
           QS QL   +  S   NR     SP SS IDRTSSIR+ MS+SIK PPTPPPLCSVCK+NA
Sbjct: 416 QSTQLTTRRD-SMATNRIEPITSPLSSTIDRTSSIRKTMSLSIKHPPTPPPLCSVCKHNA 474

Query: 155 PIFGKPPRKFSYKEIEIATDVFSSANFLAEGGYGPVYRGVMPDGQVVAVKR 3
           PIFGK PRKF YKEI  ATD FS  NFLAEGGYG VYRGV+PDGQVVAVK+
Sbjct: 475 PIFGKAPRKFDYKEIIKATDGFSRQNFLAEGGYGAVYRGVLPDGQVVAVKQ 525


>ref|XP_002512605.1| conserved hypothetical protein [Ricinus communis]
           gi|223548566|gb|EEF50057.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 815

 Score =  137 bits (345), Expect = 9e-31
 Identities = 70/113 (61%), Positives = 85/113 (75%), Gaps = 2/113 (1%)
 Frame = -3

Query: 335 SQSRQLIVNKQASKDWNRHTAPLSPSSPI--DRTSSIRRAMSISIKQPPTPPPLCSVCKY 162
           S+S   + N++ S          SPSSP    RTSSIR+AMS+SIK PPTPPPLCS+CK 
Sbjct: 346 SESPNQLPNRKYSTSSLGEEKAASPSSPSISQRTSSIRKAMSLSIKHPPTPPPLCSICKN 405

Query: 161 NAPIFGKPPRKFSYKEIEIATDVFSSANFLAEGGYGPVYRGVMPDGQVVAVKR 3
           NAPIFGK PRKF+Y+EIE ATD FSS N LA+GGYG V++G++ DGQVVAVK+
Sbjct: 406 NAPIFGKAPRKFTYREIEKATDGFSSDNLLADGGYGLVFKGILDDGQVVAVKQ 458


>emb|CBI35970.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/103 (54%), Positives = 76/103 (73%)
 Frame = -3

Query: 311 NKQASKDWNRHTAPLSPSSPIDRTSSIRRAMSISIKQPPTPPPLCSVCKYNAPIFGKPPR 132
           NK +  D +     ++  S +D + ++R A+S+S   PP PPPLCS+C++ AP+FGKPPR
Sbjct: 229 NKFSKIDRDARIGMMNYRSELDFSGNVREAISLSRNAPPGPPPLCSICQHKAPVFGKPPR 288

Query: 131 KFSYKEIEIATDVFSSANFLAEGGYGPVYRGVMPDGQVVAVKR 3
            FSY E+E+AT  FS ANFLAEGG+G V+RGV+PDGQ VAVK+
Sbjct: 289 WFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQ 331


>ref|XP_002280107.1| PREDICTED: inactive protein kinase SELMODRAFT_444075 isoform 2
           [Vitis vinifera]
          Length = 737

 Score =  121 bits (303), Expect = 7e-26
 Identities = 55/105 (52%), Positives = 78/105 (74%)
 Frame = -3

Query: 317 IVNKQASKDWNRHTAPLSPSSPIDRTSSIRRAMSISIKQPPTPPPLCSVCKYNAPIFGKP 138
           +++K +  D +     ++  S +D + ++R A+S+S   PP PPPLCS+C++ AP+FGKP
Sbjct: 319 LLDKFSKIDRDARIGMMNYRSELDFSGNVREAISLSRNAPPGPPPLCSICQHKAPVFGKP 378

Query: 137 PRKFSYKEIEIATDVFSSANFLAEGGYGPVYRGVMPDGQVVAVKR 3
           PR FSY E+E+AT  FS ANFLAEGG+G V+RGV+PDGQ VAVK+
Sbjct: 379 PRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQ 423


>ref|XP_004172691.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine-protein kinase Lck-like
           [Cucumis sativus]
          Length = 751

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/111 (53%), Positives = 75/111 (67%)
 Frame = -3

Query: 335 SQSRQLIVNKQASKDWNRHTAPLSPSSPIDRTSSIRRAMSISIKQPPTPPPLCSVCKYNA 156
           + +R   + K +  D        S  S  D    +R A+S+S   PP PPPLCS+C++ A
Sbjct: 324 ASTRNSFLLKSSKLDRESSIGMSSHRSDNDFHGDVRDAVSLSRNTPPGPPPLCSICQHKA 383

Query: 155 PIFGKPPRKFSYKEIEIATDVFSSANFLAEGGYGPVYRGVMPDGQVVAVKR 3
           P+FGKPPR FSY E+E+AT  FS ANFLAEGGYG V+RGV+PDGQVVAVK+
Sbjct: 384 PVFGKPPRWFSYAELELATGGFSQANFLAEGGYGSVHRGVLPDGQVVAVKQ 434


Top