BLASTX nr result

ID: Coptis23_contig00035668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035668
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593231.1| DNA replication licensing factor MCM9 [Medic...   166   1e-39
ref|XP_003547088.1| PREDICTED: DNA replication licensing factor ...   166   2e-39
ref|XP_002325759.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_002438061.1| hypothetical protein SORBIDRAFT_10g007540 [S...   164   9e-39
ref|XP_004137058.1| PREDICTED: DNA helicase MCM9-like [Cucumis s...   163   1e-38

>ref|XP_003593231.1| DNA replication licensing factor MCM9 [Medicago truncatula]
           gi|355482279|gb|AES63482.1| DNA replication licensing
           factor MCM9 [Medicago truncatula]
          Length = 484

 Score =  166 bits (421), Expect = 1e-39
 Identities = 84/101 (83%), Positives = 86/101 (85%)
 Frame = +2

Query: 2   SHLLLVGDPGTGKSQFLKFSAKLCNRSVIXXXXXXXXXXXXXXAVKDGGEWMLEAGALVL 181
           SH+LLVGDPGTGKSQFLKFSAKL NRSVI              AVKDGGEWMLEAGALVL
Sbjct: 158 SHMLLVGDPGTGKSQFLKFSAKLSNRSVITTGLGSTSAGLTVTAVKDGGEWMLEAGALVL 217

Query: 182 ADGGLCCIDEFDSMREHDRATIHEAMEQQTISIAKAGLVTT 304
           ADGGLCCIDEFDSMREHDRATIHEAMEQQTIS+AKAGLVTT
Sbjct: 218 ADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTT 258


>ref|XP_003547088.1| PREDICTED: DNA replication licensing factor MCM9-like [Glycine max]
          Length = 634

 Score =  166 bits (420), Expect = 2e-39
 Identities = 84/101 (83%), Positives = 86/101 (85%)
 Frame = +2

Query: 2   SHLLLVGDPGTGKSQFLKFSAKLCNRSVIXXXXXXXXXXXXXXAVKDGGEWMLEAGALVL 181
           SHLLLVGDPGTGKSQFLKF+AKL NRSVI              AVKDGGEWMLEAGALVL
Sbjct: 336 SHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAVKDGGEWMLEAGALVL 395

Query: 182 ADGGLCCIDEFDSMREHDRATIHEAMEQQTISIAKAGLVTT 304
           ADGGLCCIDEFDSMREHDRATIHEAMEQQTIS+AKAGLVTT
Sbjct: 396 ADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTT 436


>ref|XP_002325759.1| predicted protein [Populus trichocarpa] gi|222862634|gb|EEF00141.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score =  166 bits (420), Expect = 2e-39
 Identities = 84/101 (83%), Positives = 86/101 (85%)
 Frame = +2

Query: 2   SHLLLVGDPGTGKSQFLKFSAKLCNRSVIXXXXXXXXXXXXXXAVKDGGEWMLEAGALVL 181
           SHLLLVGDPGTGKSQFLKF+AKL NRSVI              AVKDGGEWMLEAGALVL
Sbjct: 356 SHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAVKDGGEWMLEAGALVL 415

Query: 182 ADGGLCCIDEFDSMREHDRATIHEAMEQQTISIAKAGLVTT 304
           ADGGLCCIDEFDSMREHDRATIHEAMEQQTIS+AKAGLVTT
Sbjct: 416 ADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTT 456


>ref|XP_002438061.1| hypothetical protein SORBIDRAFT_10g007540 [Sorghum bicolor]
           gi|241916284|gb|EER89428.1| hypothetical protein
           SORBIDRAFT_10g007540 [Sorghum bicolor]
          Length = 660

 Score =  164 bits (414), Expect = 9e-39
 Identities = 82/101 (81%), Positives = 85/101 (84%)
 Frame = +2

Query: 2   SHLLLVGDPGTGKSQFLKFSAKLCNRSVIXXXXXXXXXXXXXXAVKDGGEWMLEAGALVL 181
           SH+LLVGDPGTGKSQFLKF+AKL NRSVI              AVKDGGEWMLEAGALVL
Sbjct: 348 SHMLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAVKDGGEWMLEAGALVL 407

Query: 182 ADGGLCCIDEFDSMREHDRATIHEAMEQQTISIAKAGLVTT 304
           ADGGLCCIDEFDSMREHDR TIHEAMEQQTIS+AKAGLVTT
Sbjct: 408 ADGGLCCIDEFDSMREHDRTTIHEAMEQQTISVAKAGLVTT 448


>ref|XP_004137058.1| PREDICTED: DNA helicase MCM9-like [Cucumis sativus]
          Length = 649

 Score =  163 bits (413), Expect = 1e-38
 Identities = 83/101 (82%), Positives = 85/101 (84%)
 Frame = +2

Query: 2   SHLLLVGDPGTGKSQFLKFSAKLCNRSVIXXXXXXXXXXXXXXAVKDGGEWMLEAGALVL 181
           SHLLLVGDPGTGKSQFLKF+AKL NRSVI              AVKDGGEWMLEAGALVL
Sbjct: 354 SHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVAAVKDGGEWMLEAGALVL 413

Query: 182 ADGGLCCIDEFDSMREHDRATIHEAMEQQTISIAKAGLVTT 304
           ADGGLCCIDE DSMREHDRATIHEAMEQQTIS+AKAGLVTT
Sbjct: 414 ADGGLCCIDEVDSMREHDRATIHEAMEQQTISVAKAGLVTT 454


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