BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035653
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521133.1| pentatricopeptide repeat-containing protein,...   147   7e-34
ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]   145   3e-33
ref|XP_002320601.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]   138   4e-31

>ref|XP_002521133.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539702|gb|EEF41284.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 274

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/132 (53%), Positives = 99/132 (75%), Gaps = 1/132 (0%)
 Frame = -3

Query: 400 SWNPMLAGLVRNERFEEAMDLFRLMQVEKVQPDYVTVVAVLPAIAYTGALSLGKWVHFYV 221
           SWN M++G  +N  F+EA++LF  MQ++ + P+YVT+V+VLPAI+  GAL LGKWVH Y 
Sbjct: 126 SWNVMISGYAQNGYFKEAIELFHDMQMDDMSPNYVTLVSVLPAISRLGALELGKWVHLYA 185

Query: 220 KKMNVGMNAILGSALVDMYSKCGCIELALEVFAAVEDK-STELWNAMITGLAIHGRGKDA 44
           +K N+ +N +LGSAL+DMYSKCG IE A +VF ++ +K +   W+A+I GLA+HGR KDA
Sbjct: 186 EKNNIEVNDVLGSALIDMYSKCGSIEKATQVFESIHNKMNVVTWSAIIGGLAMHGRAKDA 245

Query: 43  LRLFSQMQAEGL 8
           L  + +MQ  G+
Sbjct: 246 LDYYRRMQEAGV 257


>ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Vitis vinifera]
          Length = 631

 Score =  145 bits (367), Expect = 3e-33
 Identities = 66/131 (50%), Positives = 96/131 (73%)
 Frame = -3

Query: 400 SWNPMLAGLVRNERFEEAMDLFRLMQVEKVQPDYVTVVAVLPAIAYTGALSLGKWVHFYV 221
           SWN M+AG  ++  F+EA+++FR MQ+ +V P+YVT+V+VLPA++  GAL LGKWVH Y 
Sbjct: 226 SWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYA 285

Query: 220 KKMNVGMNAILGSALVDMYSKCGCIELALEVFAAVEDKSTELWNAMITGLAIHGRGKDAL 41
            + N+G++ +LGSAL+DMY+KCG IE AL+VF  +  ++   W+ +I GLA+HGR KD L
Sbjct: 286 VRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTL 345

Query: 40  RLFSQMQAEGL 8
             F  M+  G+
Sbjct: 346 DHFEDMERAGV 356


>emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
          Length = 613

 Score =  145 bits (367), Expect = 3e-33
 Identities = 66/131 (50%), Positives = 96/131 (73%)
 Frame = -3

Query: 400 SWNPMLAGLVRNERFEEAMDLFRLMQVEKVQPDYVTVVAVLPAIAYTGALSLGKWVHFYV 221
           SWN M+AG  ++  F+EA+++FR MQ+ +V P+YVT+V+VLPA++  GAL LGKWVH Y 
Sbjct: 203 SWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYA 262

Query: 220 KKMNVGMNAILGSALVDMYSKCGCIELALEVFAAVEDKSTELWNAMITGLAIHGRGKDAL 41
            + N+G++ +LGSAL+DMY+KCG IE AL+VF  +  ++   W+ +I GLA+HGR KD L
Sbjct: 263 VRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTL 322

Query: 40  RLFSQMQAEGL 8
             F  M+  G+
Sbjct: 323 DHFEDMERAGV 333


>ref|XP_002320601.1| predicted protein [Populus trichocarpa] gi|222861374|gb|EEE98916.1|
           predicted protein [Populus trichocarpa]
          Length = 629

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/132 (48%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
 Frame = -3

Query: 400 SWNPMLAGLVRNERFEEAMDLFRLMQVEKVQPDYVTVVAVLPAIAYTGALSLGKWVHFYV 221
           SWN M++G  +N  F+EA+++F  MQ+  V P+YVT+V+VLPA++  GA+ LGKWVH + 
Sbjct: 223 SWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFA 282

Query: 220 KKMNVGMNAILGSALVDMYSKCGCIELALEVFAAVEDKSTEL-WNAMITGLAIHGRGKDA 44
           +K  + ++ +LGSAL+DMYSKCG I+ A++VF  + +K   + W+A+I GLA+HGR +DA
Sbjct: 283 EKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDA 342

Query: 43  LRLFSQMQAEGL 8
           L  F +MQ  G+
Sbjct: 343 LDHFWRMQQAGV 354


>emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
          Length = 485

 Score =  138 bits (348), Expect = 4e-31
 Identities = 64/131 (48%), Positives = 93/131 (70%)
 Frame = -3

Query: 400 SWNPMLAGLVRNERFEEAMDLFRLMQVEKVQPDYVTVVAVLPAIAYTGALSLGKWVHFYV 221
           SW  ML+GL ++  F+E++ LFR MQ+ K++PD +T+V VL A A TGAL  GK++H  +
Sbjct: 79  SWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLI 138

Query: 220 KKMNVGMNAILGSALVDMYSKCGCIELALEVFAAVEDKSTELWNAMITGLAIHGRGKDAL 41
            K  +  + +L +ALVDMY+KCG I+LAL+VF  +  ++   WNAMI GLA+HG G+DA+
Sbjct: 139 DKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAI 198

Query: 40  RLFSQMQAEGL 8
            LF QM+ + L
Sbjct: 199 SLFDQMEXDKL 209



 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/104 (38%), Positives = 67/104 (64%)
 Frame = -3

Query: 331 LMQVEKVQPDYVTVVAVLPAIAYTGALSLGKWVHFYVKKMNVGMNAILGSALVDMYSKCG 152
           + +++ ++PD VT+V+++PA A  G L  GK +H Y K++ +  N  + +A++DMY KC 
Sbjct: 1   MTKLDNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCD 60

Query: 151 CIELALEVFAAVEDKSTELWNAMITGLAIHGRGKDALRLFSQMQ 20
            IE A EVF  + +K    W +M++GLA  G  +++L LF +MQ
Sbjct: 61  DIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQ 104