BLASTX nr result

ID: Coptis23_contig00035633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035633
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001019178.1| ribosomal protein L22 [Ranunculus macranthus...   152   2e-35
dbj|BAG06440.1| ribosomal protein L22 [Elaeagnus formosana]           152   3e-35
ref|YP_002836130.1| ribosomal protein L22 [Megaleranthis sanicul...   143   1e-32
dbj|BAG06507.1| ribosomal protein L22 [Stauntonia hexaphylla]         100   2e-19
ref|YP_740690.1| ribosomal protein L22 [Nandina domestica] gi|12...    88   6e-16

>ref|YP_001019178.1| ribosomal protein L22 [Ranunculus macranthus]
           gi|215274766|sp|A2CHX2.1|RK22_RANMC RecName: Full=50S
           ribosomal protein L22, chloroplastic
           gi|124074980|gb|ABM90427.1| ribosomal protein L22
           [Ranunculus macranthus]
          Length = 179

 Score =  152 bits (385), Expect = 2e-35
 Identities = 69/74 (93%), Positives = 70/74 (94%)
 Frame = +2

Query: 2   CHITIVLQDISKDKNYFIWLRKYGWIYKDKYTDVRERYLYMNMMDHMLYRNRMTWANRKM 181
           CHITIVLQDISKDK YFIWLRKYGWIYKDKYTDVRERYLY  MMDHMLYRNRMTW NR+M
Sbjct: 108 CHITIVLQDISKDKKYFIWLRKYGWIYKDKYTDVRERYLY--MMDHMLYRNRMTWINREM 165

Query: 182 IWPYRDSEVLWDKK 223
           IWPYRDSEVLWDKK
Sbjct: 166 IWPYRDSEVLWDKK 179


>dbj|BAG06440.1| ribosomal protein L22 [Elaeagnus formosana]
          Length = 179

 Score =  152 bits (384), Expect = 3e-35
 Identities = 68/74 (91%), Positives = 70/74 (94%)
 Frame = +2

Query: 2   CHITIVLQDISKDKNYFIWLRKYGWIYKDKYTDVRERYLYMNMMDHMLYRNRMTWANRKM 181
           CHITIVLQDISKDK YFIWLRKYGW+YKDKYTDVRERYLY  MMDHMLYRNRMTW NR+M
Sbjct: 108 CHITIVLQDISKDKKYFIWLRKYGWVYKDKYTDVRERYLY--MMDHMLYRNRMTWINREM 165

Query: 182 IWPYRDSEVLWDKK 223
           IWPYRDSEVLWDKK
Sbjct: 166 IWPYRDSEVLWDKK 179


>ref|YP_002836130.1| ribosomal protein L22 [Megaleranthis saniculifolia]
           gi|226933922|gb|ACO92055.1| ribosomal protein L22
           [Megaleranthis saniculifolia]
          Length = 177

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/74 (89%), Positives = 70/74 (94%)
 Frame = +2

Query: 2   CHITIVLQDISKDKNYFIWLRKYGWIYKDKYTDVRERYLYMNMMDHMLYRNRMTWANRKM 181
           CHITIVL+DISK+KNYFIWLRKYGW+YKDKYTDVRERYLY  MMD  LYRNRMTWANR+M
Sbjct: 108 CHITIVLKDISKEKNYFIWLRKYGWVYKDKYTDVRERYLY--MMD--LYRNRMTWANREM 163

Query: 182 IWPYRDSEVLWDKK 223
           IWPYRDSEVLWDKK
Sbjct: 164 IWPYRDSEVLWDKK 177


>dbj|BAG06507.1| ribosomal protein L22 [Stauntonia hexaphylla]
          Length = 168

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/74 (64%), Positives = 54/74 (72%)
 Frame = +2

Query: 2   CHITIVLQDISKDKNYFIWLRKYGWIYKDKYTDVRERYLYMNMMDHMLYRNRMTWANRKM 181
           CHITIVLQDISKD  YFIWLRKYGWIYKDKYTD+RERYLY      M+ R+R+ WA    
Sbjct: 108 CHITIVLQDISKDPKYFIWLRKYGWIYKDKYTDIRERYLY------MIDRDRLKWAT--- 158

Query: 182 IWPYRDSEVLWDKK 223
                +SE +WDKK
Sbjct: 159 ----SESEAVWDKK 168


>ref|YP_740690.1| ribosomal protein L22 [Nandina domestica]
           gi|122165922|sp|Q09FS1.1|RK22_NANDO RecName: Full=50S
           ribosomal protein L22, chloroplastic
           gi|114054511|gb|ABI49904.1| ribosomal protein L22
           [Nandina domestica]
          Length = 170

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/75 (60%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   CHITIVLQDISKDKNYFIWLRKY-GWIYKDKYTDVRERYLYMNMMDHMLYRNRMTWANRK 178
           CHITIVLQDISKDKN++IWLRK  GWIYK+KY D+RE+Y Y   +   L R RM WAN  
Sbjct: 105 CHITIVLQDISKDKNFYIWLRKKGGWIYKEKYIDIREKYEY--FLHEALNRGRMEWAN-- 160

Query: 179 MIWPYRDSEVLWDKK 223
                   EV+WDKK
Sbjct: 161 -----SGYEVVWDKK 170


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