BLASTX nr result

ID: Coptis23_contig00035630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035630
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332499.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
dbj|BAD66709.1| orf177 [Beta vulgaris subsp. vulgaris]                 57   2e-06

>ref|XP_002332499.1| predicted protein [Populus trichocarpa] gi|222832595|gb|EEE71072.1|
           predicted protein [Populus trichocarpa]
          Length = 124

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 26/88 (29%), Positives = 47/88 (53%)
 Frame = +1

Query: 1   NFWVGEDKFMEVVQEAWVSQVVGNPMYRFMKRLKLTKAALIEWNKSTIGNVTKRSEETRK 180
           +FW     F+ ++ E W  +V G PMY   K+LK+ K  L E+N    G + +R  E ++
Sbjct: 19  DFWADHPLFLPLIFETWCKKVTGTPMYVLCKKLKIVKGVLKEFNLKYCGKILERMLEAKQ 78

Query: 181 EMERIQTELQNEPLNRELIKKERLIVRQ 264
           +M   Q  +Q  P + ++ K E ++ ++
Sbjct: 79  KMYEAQCRMQTHPSDLDIHKTESILAKE 106


>dbj|BAD66709.1| orf177 [Beta vulgaris subsp. vulgaris]
          Length = 177

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/75 (36%), Positives = 45/75 (60%)
 Frame = +1

Query: 25  FMEVVQEAWVSQVVGNPMYRFMKRLKLTKAALIEWNKSTIGNVTKRSEETRKEMERIQTE 204
           F +VV+++W + V G  MYR  ++L L K  L + + S    +T R E+ R+++E +Q+ 
Sbjct: 7   FEDVVRDSWGAVVHGTSMYRVWRKLSLLKVGLKQLHSSQFAGITSRIEKAREDLEVVQSS 66

Query: 205 LQNEPLNRELIKKER 249
           LQ  PLN  L  +E+
Sbjct: 67  LQAAPLNPSLHSQEK 81


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