BLASTX nr result

ID: Coptis23_contig00035628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035628
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002893465.1| F17L21.18 [Arabidopsis lyrata subsp. lyrata]...    62   4e-08
ref|NP_189343.1| mitochondrial import receptor subunit TOM20-1 [...    59   3e-07
ref|XP_004142933.1| PREDICTED: mitochondrial import receptor sub...    57   2e-06
sp|P92792.1|TOM20_SOLTU RecName: Full=Mitochondrial import recep...    57   2e-06
ref|XP_004159545.1| PREDICTED: mitochondrial import receptor sub...    56   3e-06

>ref|XP_002893465.1| F17L21.18 [Arabidopsis lyrata subsp. lyrata]
           gi|297339307|gb|EFH69724.1| F17L21.18 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 205

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/62 (46%), Positives = 43/62 (69%)
 Frame = -3

Query: 295 PLNIENLTNWGKVLLEIAKFKELVDALPMLDDAVKKLEQCVSLESDSHKAWFLLGHAYMS 116
           PL+ ENL  WG  LLE+++F+ + DA  ML+DA+ KLE+ ++L    H+A + LG+AY S
Sbjct: 29  PLDSENLVKWGGALLELSQFQNIPDAKVMLNDAISKLEEALTLNPGKHQALWCLGNAYTS 88

Query: 115 IA 110
            A
Sbjct: 89  HA 90


>ref|NP_189343.1| mitochondrial import receptor subunit TOM20-1 [Arabidopsis
           thaliana] gi|13631831|sp|P82872.1|TO201_ARATH RecName:
           Full=Mitochondrial import receptor subunit TOM20-1;
           AltName: Full=Translocase of outer membrane 20 kDa
           subunit 1 gi|9279630|dbj|BAB01088.1| TOM20-like protein
           [Arabidopsis thaliana] gi|11340685|emb|CAC17150.1|
           TOM20-1 protein [Arabidopsis thaliana]
           gi|332643741|gb|AEE77262.1| mitochondrial import
           receptor subunit TOM20-1 [Arabidopsis thaliana]
          Length = 188

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/62 (40%), Positives = 42/62 (67%)
 Frame = -3

Query: 295 PLNIENLTNWGKVLLEIAKFKELVDALPMLDDAVKKLEQCVSLESDSHKAWFLLGHAYMS 116
           P + +NL  WG+ LLE+++F+ ++D+L M+ DA+ KLE  + ++   H A + LG+AY S
Sbjct: 22  PEDADNLMRWGEALLELSQFQNVIDSLKMIQDAISKLEDAILIDPMKHDAVWCLGNAYTS 81

Query: 115 IA 110
            A
Sbjct: 82  YA 83


>ref|XP_004142933.1| PREDICTED: mitochondrial import receptor subunit TOM20-like
           [Cucumis sativus]
          Length = 204

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/62 (40%), Positives = 43/62 (69%)
 Frame = -3

Query: 295 PLNIENLTNWGKVLLEIAKFKELVDALPMLDDAVKKLEQCVSLESDSHKAWFLLGHAYMS 116
           PL+ +NLT WG  LLE+++F+ + D+  M+ DAV+KLE+ +++    H A + +G+A+ S
Sbjct: 29  PLDADNLTKWGGALLELSQFQSVSDSKNMIKDAVEKLEEALTINPTKHDALWCIGNAHTS 88

Query: 115 IA 110
            A
Sbjct: 89  QA 90


>sp|P92792.1|TOM20_SOLTU RecName: Full=Mitochondrial import receptor subunit TOM20; AltName:
           Full=Translocase of outer membrane 20 kDa subunit
           gi|1524370|emb|CAA63223.1| TOM20 [Solanum tuberosum]
          Length = 204

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/88 (31%), Positives = 49/88 (55%)
 Frame = -3

Query: 295 PLNIENLTNWGKVLLEIAKFKELVDALPMLDDAVKKLEQCVSLESDSHKAWFLLGHAYMS 116
           PL+ +NLT WG  LLE+++F+ + ++  M+ DA  KLE+ +++  + H A + LG+A+ S
Sbjct: 28  PLDADNLTRWGGALLELSQFQPVAESKQMISDATSKLEEALTVNPEKHDALWCLGNAHTS 87

Query: 115 IAXXXXXXXXXXXXXXKYEMALQCYGEA 32
                            +E A QC+ +A
Sbjct: 88  ---HVFLTPDMDEAKVYFEKATQCFQQA 112


>ref|XP_004159545.1| PREDICTED: mitochondrial import receptor subunit TOM20-like
           [Cucumis sativus]
          Length = 204

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/62 (40%), Positives = 42/62 (67%)
 Frame = -3

Query: 295 PLNIENLTNWGKVLLEIAKFKELVDALPMLDDAVKKLEQCVSLESDSHKAWFLLGHAYMS 116
           PL+ +NLT WG  LLE+++F+ + D+  M+ DAV KLE+ +++    H A + +G+A+ S
Sbjct: 29  PLDADNLTKWGGALLELSQFQSVSDSKNMIKDAVGKLEEALTINPTKHDALWCIGNAHTS 88

Query: 115 IA 110
            A
Sbjct: 89  QA 90


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