BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035623
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat...   261   3e-68
ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat...   242   3e-62
ref|NP_001031987.1| pentatricopeptide repeat-containing protein ...   235   2e-60
ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat...   234   4e-60
ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arab...   234   4e-60

>ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like [Vitis vinifera]
          Length = 615

 Score =  261 bits (668), Expect = 3e-68
 Identities = 129/161 (80%), Positives = 142/161 (88%)
 Frame = -3

Query: 483 LGELASQNLVELEAKNDGAYVLLSNIYADSRDWDGVTNVRKLMMNKGVKKIPACSVMEVG 304
           +GELAS+ +VELEAKN GAYVLLSNIYADS+DWD V+NVR+ M  KGV+K P CSV+EVG
Sbjct: 430 MGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVIEVG 489

Query: 303 GEVHEFFVGDKSHPRYGEIEVMLDEIARRLKLSGYVANTNPVLFDIDEEEKEDALVRHSE 124
           GEVHEFFVGDKSHPRY EI+VML EI+RRLKLSGYVANTNPV FDI+EEEKEDAL  HSE
Sbjct: 490 GEVHEFFVGDKSHPRYAEIQVMLGEISRRLKLSGYVANTNPVFFDIEEEEKEDALCMHSE 549

Query: 123 KVAIAFGLISLGEGVPIRIVKNLRVCSDCHEVTKMISKVFN 1
           K+AIAFGLISL   VPIRIVKNLRVC DCH+ TKMISK FN
Sbjct: 550 KIAIAFGLISLSPDVPIRIVKNLRVCWDCHDATKMISKAFN 590


>ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like [Glycine max]
          Length = 616

 Score =  242 bits (617), Expect = 3e-62
 Identities = 117/161 (72%), Positives = 139/161 (86%)
 Frame = -3

Query: 483 LGELASQNLVELEAKNDGAYVLLSNIYADSRDWDGVTNVRKLMMNKGVKKIPACSVMEVG 304
           LGE+A + +VELE KNDGAYVLLSNIYAD ++W+ V+++R+ M  KGVKK+P CSV+EV 
Sbjct: 431 LGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGCSVIEVD 490

Query: 303 GEVHEFFVGDKSHPRYGEIEVMLDEIARRLKLSGYVANTNPVLFDIDEEEKEDALVRHSE 124
           GEVHEF VGDKSHPRY EIE+ L+EI++ L+LSGYVANTNPVLFDI+EEEKEDAL +HSE
Sbjct: 491 GEVHEFIVGDKSHPRYDEIEMKLEEISKCLRLSGYVANTNPVLFDIEEEEKEDALSKHSE 550

Query: 123 KVAIAFGLISLGEGVPIRIVKNLRVCSDCHEVTKMISKVFN 1
           KVAIAFGLISL   VPIR+V NLR+C DCH V KMISK+FN
Sbjct: 551 KVAIAFGLISLKGVVPIRVVMNLRICWDCHNVAKMISKIFN 591


>ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g40405 gi|10178152|dbj|BAB11597.1|
           selenium-binding protein-like [Arabidopsis thaliana]
           gi|332007161|gb|AED94544.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 612

 Score =  235 bits (600), Expect = 2e-60
 Identities = 113/161 (70%), Positives = 136/161 (84%)
 Frame = -3

Query: 483 LGELASQNLVELEAKNDGAYVLLSNIYADSRDWDGVTNVRKLMMNKGVKKIPACSVMEVG 304
           LG LAS+ ++ELE  N GAYVLLSNIYADS DWD V++VR+ M +KGV+K P CSVMEV 
Sbjct: 427 LGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVN 486

Query: 303 GEVHEFFVGDKSHPRYGEIEVMLDEIARRLKLSGYVANTNPVLFDIDEEEKEDALVRHSE 124
           GEVHEFFVGDKSHP+Y +I+ +  +I+RRL+L+GY A+T PV+FDIDEEEKEDAL  HSE
Sbjct: 487 GEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSE 546

Query: 123 KVAIAFGLISLGEGVPIRIVKNLRVCSDCHEVTKMISKVFN 1
           K AIAFG++SL E VPIRIVKNLRVC DCH+V+ MISK+FN
Sbjct: 547 KAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFN 587


>ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like [Cucumis sativus]
          Length = 614

 Score =  234 bits (598), Expect = 4e-60
 Identities = 113/160 (70%), Positives = 135/160 (84%)
 Frame = -3

Query: 483 LGELASQNLVELEAKNDGAYVLLSNIYADSRDWDGVTNVRKLMMNKGVKKIPACSVMEVG 304
           LGE AS+ L+E+E KN GAYV LSNIYAD+ +WD V+NVR+ M  +G+ K+P CSVMEV 
Sbjct: 429 LGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLPGCSVMEVN 488

Query: 303 GEVHEFFVGDKSHPRYGEIEVMLDEIARRLKLSGYVANTNPVLFDIDEEEKEDALVRHSE 124
           GEVHEFF GDKSHP Y  IE M  EI++RLKL+GYVA+TN VLFDI+EEEKEDAL +HSE
Sbjct: 489 GEVHEFFSGDKSHPSYDVIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKEDALCKHSE 548

Query: 123 KVAIAFGLISLGEGVPIRIVKNLRVCSDCHEVTKMISKVF 4
           K+AIAFGL SL EG+PIRIVKNLR+C DCH+V+KMISK+F
Sbjct: 549 KMAIAFGLFSLKEGLPIRIVKNLRICWDCHDVSKMISKIF 588


>ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
           lyrata] gi|297316544|gb|EFH46967.1| hypothetical protein
           ARALYDRAFT_493946 [Arabidopsis lyrata subsp. lyrata]
          Length = 1111

 Score =  234 bits (598), Expect = 4e-60
 Identities = 113/161 (70%), Positives = 135/161 (83%)
 Frame = -3

Query: 483 LGELASQNLVELEAKNDGAYVLLSNIYADSRDWDGVTNVRKLMMNKGVKKIPACSVMEVG 304
           LG LAS+ ++ELE  N GAYVLLSNIYADS DWD V++VR+ M +KGV+K P CSVMEV 
Sbjct: 435 LGVLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVRKQPGCSVMEVN 494

Query: 303 GEVHEFFVGDKSHPRYGEIEVMLDEIARRLKLSGYVANTNPVLFDIDEEEKEDALVRHSE 124
           GEVHEFFVGDKSHP+Y EI+ +  +I+RRL+L+GY A+T PV+FDIDEEEKEDAL  HSE
Sbjct: 495 GEVHEFFVGDKSHPKYNEIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSE 554

Query: 123 KVAIAFGLISLGEGVPIRIVKNLRVCSDCHEVTKMISKVFN 1
           K AIAFG++SL   VPIRIVKNLRVC DCH+V+ MISK+FN
Sbjct: 555 KAAIAFGIMSLKADVPIRIVKNLRVCGDCHQVSMMISKIFN 595



 Score =  135 bits (340), Expect = 3e-30
 Identities = 69/160 (43%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
 Frame = -3

Query: 483  LGELASQNLVELEAKNDGAYVLLSNIYADSRDWDGVTNVRKLMMNKGVKKIPACSVMEVG 304
            LG  A++ L ELE ++   Y++LSNIY+ S  W   + +R LM  KG+ +    S +E G
Sbjct: 925  LGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRASGYSYIEHG 984

Query: 303  GEVHEFFVGDKSHPRYGEIEVMLDEIARRLKLS-GYVANTNPVLFDIDEEEKEDALVRHS 127
             ++H+F VGD SHP   +I+  L EI +++K   G+ + T  VL D+DE+ KE+ + +HS
Sbjct: 985  NKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSELGFKSRTEFVLHDVDEDVKEEMINQHS 1044

Query: 126  EKVAIAFGLISLGEGVPIRIVKNLRVCSDCHEVTKMISKV 7
            EK+A+AFGL+ +    PI I KNLR+C DCHE  K IS +
Sbjct: 1045 EKIAMAFGLLVISPMEPIIIRKNLRICGDCHETAKAISLI 1084