BLASTX nr result

ID: Coptis23_contig00035609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035609
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531695.1| PREDICTED: root phototropism protein 3-like ...   293   3e-77
ref|XP_002336081.1| predicted protein [Populus trichocarpa] gi|2...   293   3e-77
ref|XP_002281013.1| PREDICTED: root phototropism protein 3 [Viti...   291   7e-77
ref|XP_002517554.1| signal transducer, putative [Ricinus communi...   291   1e-76
ref|XP_003529816.1| PREDICTED: root phototropism protein 3-like ...   287   1e-75

>ref|XP_003531695.1| PREDICTED: root phototropism protein 3-like [Glycine max]
          Length = 445

 Score =  293 bits (749), Expect = 3e-77
 Identities = 150/207 (72%), Positives = 174/207 (84%), Gaps = 2/207 (0%)
 Frame = -2

Query: 616 KMIKLSSPESAAITAMSMGQLAVECWFDDTSILDMDYFIKTLSGIKAKGVRPDMIGSIIT 437
           +M K S PES    A S  Q + ECWFDD  ILDMDYF+KTLSGIKAKGVR D+IGSIIT
Sbjct: 24  EMKKQSYPESLTFQAKSPSQFSSECWFDDACILDMDYFVKTLSGIKAKGVRADLIGSIIT 83

Query: 436 NFACKWLPELSE-DETKQTSTSSKYSPESVTAQWMKKRFFVETLVGILPPEKESISCNFL 260
           ++A KWLP+LS  D  ++  T  + SPESVTA WMKKRFFVETLVG+LPPEK++I CNFL
Sbjct: 84  HYASKWLPDLSAGDMAERGLTQFEESPESVTASWMKKRFFVETLVGVLPPEKDAIPCNFL 143

Query: 259 LRLLRTANMVGVEPTYRIDLEKRISWQLDQASLKELMIPSFSHTCGTVLDVELVLHLVRR 80
           LRLLRTANMVGVE TYR +LEKRISWQLDQASLKEL+IPSFSHTCGT+LDVELV+ LV+R
Sbjct: 144 LRLLRTANMVGVEGTYRQELEKRISWQLDQASLKELVIPSFSHTCGTLLDVELVIRLVKR 203

Query: 79  FINMD-DITKTGAALVKVAKLVDSYLA 2
           F+++D +  K+GA+LVKVAKLVDSYLA
Sbjct: 204 FVSLDSEGAKSGASLVKVAKLVDSYLA 230


>ref|XP_002336081.1| predicted protein [Populus trichocarpa] gi|222871395|gb|EEF08526.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score =  293 bits (749), Expect = 3e-77
 Identities = 143/202 (70%), Positives = 165/202 (81%), Gaps = 2/202 (0%)
 Frame = -2

Query: 601 SSPESAAITAMSMGQLAVECWFDDTSILDMDYFIKTLSGIKAKGVRPDMIGSIITNFACK 422
           S PES   + +   Q A ECWFDD  ILDMDYF KTL+GIKAKGVRPD IGSII ++A K
Sbjct: 5   SFPESVLSSGLKTSQFAAECWFDDACILDMDYFAKTLAGIKAKGVRPDFIGSIIAHYASK 64

Query: 421 WLPELSEDETKQTSTSSKY--SPESVTAQWMKKRFFVETLVGILPPEKESISCNFLLRLL 248
           WLP+LS D        + +  SPESVTA WMKKRFFVETLVGILPPEK+SI C+FLLRLL
Sbjct: 65  WLPDLSGDHLSSNKGLANFEESPESVTALWMKKRFFVETLVGILPPEKDSIPCSFLLRLL 124

Query: 247 RTANMVGVEPTYRIDLEKRISWQLDQASLKELMIPSFSHTCGTVLDVELVLHLVRRFINM 68
           R ANMV VEP YR +LEKRISWQLDQASLKE+MIPSFSHTCGT+LDVEL++ LVR F+N+
Sbjct: 125 RIANMVSVEPAYRAELEKRISWQLDQASLKEIMIPSFSHTCGTLLDVELIIRLVRSFVNL 184

Query: 67  DDITKTGAALVKVAKLVDSYLA 2
           D++ K+G+AL+KVAKLVDSYLA
Sbjct: 185 DEVAKSGSALIKVAKLVDSYLA 206


>ref|XP_002281013.1| PREDICTED: root phototropism protein 3 [Vitis vinifera]
           gi|297743368|emb|CBI36235.3| unnamed protein product
           [Vitis vinifera]
          Length = 433

 Score =  291 bits (746), Expect = 7e-77
 Identities = 149/204 (73%), Positives = 166/204 (81%)
 Frame = -2

Query: 613 MIKLSSPESAAITAMSMGQLAVECWFDDTSILDMDYFIKTLSGIKAKGVRPDMIGSIITN 434
           M KL+ PES  + A      A ECW DD  ILDMDYF+KTLSGIKAKGVRPD+IGSII +
Sbjct: 1   MKKLALPESITL-AGKRPIFAAECWLDDACILDMDYFVKTLSGIKAKGVRPDLIGSIIAH 59

Query: 433 FACKWLPELSEDETKQTSTSSKYSPESVTAQWMKKRFFVETLVGILPPEKESISCNFLLR 254
           +A KWLPEL  D+ K   T  + SPES T  WMKKRFFVETLVGILPPEK+SI CNFLLR
Sbjct: 60  YASKWLPELLTDDEKGL-TIFEESPESATTSWMKKRFFVETLVGILPPEKDSIPCNFLLR 118

Query: 253 LLRTANMVGVEPTYRIDLEKRISWQLDQASLKELMIPSFSHTCGTVLDVELVLHLVRRFI 74
           LLRTANMVGVEPTYR +LE RISWQLDQASLKELMIPSF HTC T+LDVELV+ LV+RF+
Sbjct: 119 LLRTANMVGVEPTYRAELESRISWQLDQASLKELMIPSFCHTCATLLDVELVMRLVKRFV 178

Query: 73  NMDDITKTGAALVKVAKLVDSYLA 2
           NMD   K+GAAL+KVAKL+DSYLA
Sbjct: 179 NMDAAAKSGAALIKVAKLIDSYLA 202


>ref|XP_002517554.1| signal transducer, putative [Ricinus communis]
           gi|223543186|gb|EEF44718.1| signal transducer, putative
           [Ricinus communis]
          Length = 428

 Score =  291 bits (744), Expect = 1e-76
 Identities = 149/209 (71%), Positives = 173/209 (82%), Gaps = 5/209 (2%)
 Frame = -2

Query: 613 MIKLSSPESAAITAMSMGQLAVECWFDDTSILDMDYFIKTLSGIKAKGVRPDMIGSIITN 434
           M K+S  +S      +  + A ECWFDD  IL+MDYF+KTL+GIKAKGVRPD+IGSII +
Sbjct: 1   MKKISLQDSVTFPGKT-SEFAGECWFDDACILNMDYFVKTLAGIKAKGVRPDLIGSIIAH 59

Query: 433 FACKWLPELSED--ETKQTSTSSKYSPESVTAQWMKKRFFVETLVGILPPEKESISCNFL 260
           +A KWLPELS D   T++  T+ + SPE VTA WMKKRFFVETLVG+LPPEK+SI CNFL
Sbjct: 60  YASKWLPELSGDGTATERGLTNFEESPECVTASWMKKRFFVETLVGVLPPEKDSIPCNFL 119

Query: 259 LRLLRTANMVGVEPTYRIDLEKRISWQLDQASLKELMIPSFSHTCGTVLDVELVLHLVRR 80
           LRLLRTANMVGVEPTYR +LEKRISWQLDQASLKELMIPSFSHTCGT+LDVEL++ LVRR
Sbjct: 120 LRLLRTANMVGVEPTYRAELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELMIRLVRR 179

Query: 79  FINMDDITKT---GAALVKVAKLVDSYLA 2
           F+N+D+  K+   GAALVKVAKLVD YLA
Sbjct: 180 FVNLDEAAKSGGGGAALVKVAKLVDCYLA 208


>ref|XP_003529816.1| PREDICTED: root phototropism protein 3-like [Glycine max]
          Length = 423

 Score =  287 bits (735), Expect = 1e-75
 Identities = 148/206 (71%), Positives = 172/206 (83%), Gaps = 2/206 (0%)
 Frame = -2

Query: 613 MIKLSSPESAAITAMSMGQLAVECWFDDTSILDMDYFIKTLSGIKAKGVRPDMIGSIITN 434
           M K S PES  + A S  Q + ECWFDD  ILDMDYF+KTLSGIKAKGVR D+IG IIT+
Sbjct: 1   MKKQSCPESLILQAKSPSQFSSECWFDDACILDMDYFVKTLSGIKAKGVRADLIGFIITH 60

Query: 433 FACKWLPELSE-DETKQTSTSSKYSPESVTAQWMKKRFFVETLVGILPPEKESISCNFLL 257
           +A KWLP+LS  D  ++  T  + SPESVTA WMKKRFFVETLVG+LPPEK++I CNFLL
Sbjct: 61  YASKWLPDLSAGDMAEKGLTQFEESPESVTASWMKKRFFVETLVGVLPPEKDAIPCNFLL 120

Query: 256 RLLRTANMVGVEPTYRIDLEKRISWQLDQASLKELMIPSFSHTCGTVLDVELVLHLVRRF 77
           RLLRTANMVGVE TYR +LEKRISWQLDQASLKEL+IPSFSHTCGT+LDVELV+ LV+RF
Sbjct: 121 RLLRTANMVGVEGTYRQELEKRISWQLDQASLKELVIPSFSHTCGTLLDVELVIRLVKRF 180

Query: 76  INMD-DITKTGAALVKVAKLVDSYLA 2
           +++D +  K+ A+LVKVAKLVDSYLA
Sbjct: 181 VSLDSEGAKSVASLVKVAKLVDSYLA 206


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