BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035603
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002877101.1| abc transporter family protein [Arabidopsis ...   221   4e-56
ref|XP_003618408.1| ABC transporter B family member [Medicago tr...   221   6e-56
ref|NP_189475.1| ABC transporter B family member 15 [Arabidopsis...   220   8e-56
ref|XP_003618396.1| ABC transporter B family member [Medicago tr...   219   2e-55
ref|XP_003618412.1| ABC transporter B family member [Medicago tr...   217   7e-55

>ref|XP_002877101.1| abc transporter family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322939|gb|EFH53360.1| abc transporter family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1239

 Score =  221 bits (564), Expect = 4e-56
 Identities = 103/156 (66%), Positives = 131/156 (83%)
 Frame = -3

Query: 469 MALGLFGSIGDGILTPVMLLVTSKIMNNLGMGPGDDPAQFLRTISKNSINFLYMACGVFF 290
           M+LGL G++GDG  TP++LL+TSK+MNNLG G   +   F+++ISKNS+  LY+ACG + 
Sbjct: 35  MSLGLIGAVGDGFTTPLVLLITSKLMNNLG-GSSFNTDTFMQSISKNSVALLYVACGSWV 93

Query: 289 VCFLEGYCWTRTGERQASRMRHRYLEAVLRQDVGYFDLKVASTSEVVDSVCNDSLIIQDV 110
           VCFLEGYCWTRTGERQ +RMR +YL AVLRQDVGYFDL V STS+V+ SV +DS +IQDV
Sbjct: 94  VCFLEGYCWTRTGERQTARMREKYLRAVLRQDVGYFDLHVTSTSDVITSVSSDSFVIQDV 153

Query: 109 ISEKVPNFVLNLSTFIGSYIVAFVLMWRLAIVGFPF 2
           +SEK+PNF+++ STF+GSYIV F+L+WRLAIVG PF
Sbjct: 154 LSEKLPNFLMSASTFVGSYIVGFILLWRLAIVGLPF 189


>ref|XP_003618408.1| ABC transporter B family member [Medicago truncatula]
           gi|355493423|gb|AES74626.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 1273

 Score =  221 bits (562), Expect = 6e-56
 Identities = 104/156 (66%), Positives = 127/156 (81%)
 Frame = -3

Query: 469 MALGLFGSIGDGILTPVMLLVTSKIMNNLGMGPGDDPAQFLRTISKNSINFLYMACGVFF 290
           MA GLFG+IGDGI+TP++L ++SK+MN++G   G     F+  I +N+I  LY+AC  F 
Sbjct: 37  MAFGLFGAIGDGIMTPLLLFISSKLMNSIGTISGTSSNNFVHNIYENAIVLLYLACASFV 96

Query: 289 VCFLEGYCWTRTGERQASRMRHRYLEAVLRQDVGYFDLKVASTSEVVDSVCNDSLIIQDV 110
            CFLEGYCWTRTGERQA+RMR RYL+AVLRQ+V YFDL + STSEV+ SV NDSL+IQDV
Sbjct: 97  ACFLEGYCWTRTGERQAARMRVRYLKAVLRQEVSYFDLHITSTSEVITSVSNDSLVIQDV 156

Query: 109 ISEKVPNFVLNLSTFIGSYIVAFVLMWRLAIVGFPF 2
           +SEKVPN ++N S FIGSYIVAF L+WRLAIVGFPF
Sbjct: 157 LSEKVPNLLMNASMFIGSYIVAFTLLWRLAIVGFPF 192



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/150 (24%), Positives = 71/150 (47%)
 Frame = -3

Query: 463  LGLFGSIGDGILTPVMLLVTSKIMNNLGMGPGDDPAQFLRTISKNSINFLYMACGVFFVC 284
            LG   ++  G + PV       +++   +   +D  +  R I   +  FL +A     V 
Sbjct: 696  LGCINAVLFGAIRPVYSFAMGSVISVYFL---EDHDEIKRQIRIYAFCFLGLAVISMVVN 752

Query: 283  FLEGYCWTRTGERQASRMRHRYLEAVLRQDVGYFDLKVASTSEVVDSVCNDSLIIQDVIS 104
             L+ Y +   GE    R+R R    +L  +VG+FD    ST  V   +  ++ +++ ++S
Sbjct: 753  VLQHYSFAYMGEYLTKRVRERMFSKILTFEVGWFDEDQNSTGVVCSRLAKEANMVRSLVS 812

Query: 103  EKVPNFVLNLSTFIGSYIVAFVLMWRLAIV 14
            +++   V  +S  + S+ +  ++ WRLAIV
Sbjct: 813  DRLALVVQTISAVVISFTMGLIIAWRLAIV 842


>ref|NP_189475.1| ABC transporter B family member 15 [Arabidopsis thaliana]
           gi|75334996|sp|Q9LHD1.1|AB15B_ARATH RecName: Full=ABC
           transporter B family member 15; Short=ABC transporter
           ABCB.15; Short=AtABCB15; AltName: Full=Multidrug
           resistance protein 13; AltName: Full=P-glycoprotein 15
           gi|11994581|dbj|BAB02627.1| multidrug resistance
           p-glycoprotein [Arabidopsis thaliana]
           gi|332643915|gb|AEE77436.1| ABC transporter B family
           member 15 [Arabidopsis thaliana]
          Length = 1240

 Score =  220 bits (561), Expect = 8e-56
 Identities = 102/156 (65%), Positives = 130/156 (83%)
 Frame = -3

Query: 469 MALGLFGSIGDGILTPVMLLVTSKIMNNLGMGPGDDPAQFLRTISKNSINFLYMACGVFF 290
           M LGL G++GDG  TP++LL+TSK+MNN+G G   +   F+++ISKNS+  LY+ACG + 
Sbjct: 35  MGLGLIGAVGDGFTTPLVLLITSKLMNNIG-GSSFNTDTFMQSISKNSVALLYVACGSWV 93

Query: 289 VCFLEGYCWTRTGERQASRMRHRYLEAVLRQDVGYFDLKVASTSEVVDSVCNDSLIIQDV 110
           VCFLEGYCWTRTGERQ +RMR +YL AVLRQDVGYFDL V STS+V+ SV +DS +IQDV
Sbjct: 94  VCFLEGYCWTRTGERQTARMREKYLRAVLRQDVGYFDLHVTSTSDVITSVSSDSFVIQDV 153

Query: 109 ISEKVPNFVLNLSTFIGSYIVAFVLMWRLAIVGFPF 2
           +SEK+PNF+++ STF+GSYIV F+L+WRLAIVG PF
Sbjct: 154 LSEKLPNFLMSASTFVGSYIVGFILLWRLAIVGLPF 189


>ref|XP_003618396.1| ABC transporter B family member [Medicago truncatula]
           gi|355493411|gb|AES74614.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 1275

 Score =  219 bits (557), Expect = 2e-55
 Identities = 101/156 (64%), Positives = 123/156 (78%)
 Frame = -3

Query: 469 MALGLFGSIGDGILTPVMLLVTSKIMNNLGMGPGDDPAQFLRTISKNSINFLYMACGVFF 290
           M  GL GSIGDGI  P++L +  ++MN++G   G     F+  I+KN++ FLY+AC  F 
Sbjct: 36  MVFGLIGSIGDGISVPLLLFIAGRLMNSIGSASGASSNNFVHDINKNAVLFLYLACASFV 95

Query: 289 VCFLEGYCWTRTGERQASRMRHRYLEAVLRQDVGYFDLKVASTSEVVDSVCNDSLIIQDV 110
            CFLEGYCWTRTGERQA+RMR RYL+A+LRQDV YFDL + STSEV+ SV NDSL+IQDV
Sbjct: 96  ACFLEGYCWTRTGERQAARMRVRYLKAILRQDVAYFDLHITSTSEVITSVSNDSLVIQDV 155

Query: 109 ISEKVPNFVLNLSTFIGSYIVAFVLMWRLAIVGFPF 2
           ISEKVPNF++N S F+GSYI AF L+WRLAIVGFPF
Sbjct: 156 ISEKVPNFLMNASMFLGSYIAAFALLWRLAIVGFPF 191



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/150 (22%), Positives = 70/150 (46%)
 Frame = -3

Query: 463  LGLFGSIGDGILTPVMLLVTSKIMNNLGMGPGDDPAQFLRTISKNSINFLYMACGVFFVC 284
            LG F ++  G + PV       +++   +   +D  +  + I      FL +A     + 
Sbjct: 698  LGCFNAVLFGAIQPVYSFAMGSVISVYFI---EDHDEIKKQIRIYGFCFLGLAVISMVIN 754

Query: 283  FLEGYCWTRTGERQASRMRHRYLEAVLRQDVGYFDLKVASTSEVVDSVCNDSLIIQDVIS 104
             L+ Y +   GE    R+R +    +L  +VG+FD    ST  V   +  D+ +++ ++ 
Sbjct: 755  MLQHYSFAYMGEYLTKRVREKMFSKILTFEVGWFDEDQNSTGSVCSRLAKDANVVRSLVG 814

Query: 103  EKVPNFVLNLSTFIGSYIVAFVLMWRLAIV 14
            +++   V  +S  + ++ +  ++ W+LAIV
Sbjct: 815  DRLALVVQTISAVVIAFTMGLIIAWKLAIV 844


>ref|XP_003618412.1| ABC transporter B family member [Medicago truncatula]
           gi|355493427|gb|AES74630.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 1279

 Score =  217 bits (553), Expect = 7e-55
 Identities = 104/159 (65%), Positives = 128/159 (80%), Gaps = 3/159 (1%)
 Frame = -3

Query: 469 MALGLFGSIGDGILTPVMLLVTSKIMNNLGMGPGDDPAQFLRTISKNSINFLYMACGVFF 290
           MA GL G+IGDG++TP++L +TS+IMN++G   G     F+  I++N++  LY+AC  F 
Sbjct: 36  MAFGLIGAIGDGLMTPLVLFITSRIMNSIGTISGSSSTNFVHNINENALVLLYLACASFA 95

Query: 289 VCFL---EGYCWTRTGERQASRMRHRYLEAVLRQDVGYFDLKVASTSEVVDSVCNDSLII 119
            CFL   EGYCWTRTGERQA+RMR RYL+AVLRQ+V YFDL V STSEV+ SV NDSL+I
Sbjct: 96  ACFLGTSEGYCWTRTGERQAARMRARYLKAVLRQEVAYFDLHVTSTSEVITSVSNDSLVI 155

Query: 118 QDVISEKVPNFVLNLSTFIGSYIVAFVLMWRLAIVGFPF 2
           QDV+SEKVPNF++N S FIGSYIVAF L+WRLAIVGFPF
Sbjct: 156 QDVLSEKVPNFLMNASMFIGSYIVAFALLWRLAIVGFPF 194



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/150 (23%), Positives = 69/150 (46%)
 Frame = -3

Query: 463  LGLFGSIGDGILTPVMLLVTSKIMNNLGMGPGDDPAQFLRTISKNSINFLYMACGVFFVC 284
            LG   ++  G + PV       +++   +   +D  +  + I      FL +A     V 
Sbjct: 702  LGCINAVLFGAIQPVYSFALGSVVSVYFL---EDHDEIKKQIRIYVFCFLGLAVISLVVN 758

Query: 283  FLEGYCWTRTGERQASRMRHRYLEAVLRQDVGYFDLKVASTSEVVDSVCNDSLIIQDVIS 104
             L+ Y +   GE    R+R R    +L  +VG+FD    ST  V   +  D+ +++ ++ 
Sbjct: 759  VLQHYSFAYMGEYLTKRVRERMFSKILTFEVGWFDEDRNSTGSVCSRLAKDANVVRSLVG 818

Query: 103  EKVPNFVLNLSTFIGSYIVAFVLMWRLAIV 14
            +++   V  +S  + ++ +  ++ WRLAIV
Sbjct: 819  DRLALVVQTISAVVIAFTMGLIIAWRLAIV 848