BLASTX nr result

ID: Coptis23_contig00035599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035599
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19378.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002320664.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18
ref|XP_003634344.1| PREDICTED: uncharacterized protein LOC100267...    92   6e-17
ref|XP_002525295.1| conserved hypothetical protein [Ricinus comm...    92   6e-17
ref|XP_002310332.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16

>emb|CBI19378.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score =  103 bits (258), Expect = 1e-20
 Identities = 54/117 (46%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
 Frame = -1

Query: 382 LTDCSGRMSEASVIGYPGGSVNIVPRSFSVNSSRSNDDEDIKELMRAASQRGLREKLEME 203
           LTD + R+S  + +G PG  ++ +P+SFSV+SSRS D ED+  L R+ S      +++M 
Sbjct: 33  LTDAAERVSRGNAMGCPGVHISTLPKSFSVSSSRSGDGEDVGSLSRSGSASSSSNRVDMN 92

Query: 202 IQQLQQLSKKTDALPRSRTVAIGRIDEDKPCDFDED-LETKPDLLYPRSKSYAVSKK 35
           +  LQ     + A PRS +V +GRIDED+PCDF+ED    K D LYPRS+SYAV+ +
Sbjct: 93  V-FLQPPKMGSRAAPRSCSVGMGRIDEDRPCDFEEDSFNVKADFLYPRSRSYAVTNR 148


>ref|XP_002320664.1| predicted protein [Populus trichocarpa] gi|222861437|gb|EEE98979.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 56/119 (47%), Positives = 79/119 (66%), Gaps = 12/119 (10%)
 Frame = -1

Query: 355 EASVIGYPGGSVNIVPRSFSVNSSRSND-DEDIKELMRAASQRG----LREKLEMEIQQL 191
           +  V+  P G+ N +PRS+SV+S++ N  D+D +E +RAAS R        K+ +++   
Sbjct: 41  QVCVMSCPTGNFNTMPRSYSVSSTKPNHLDDDRREPLRAASTRSNLGSRNSKINVDVPAR 100

Query: 190 QQLSKKTDA------LPRSRTVAIGRIDEDKPCDFD-EDLETKPDLLYPRSKSYAVSKK 35
           QQ S K  A      +PRS TVAIGRIDE+KPCDFD ED++ K + +YPRS+SYAVSK+
Sbjct: 101 QQYSHKKSATRLGDNMPRSHTVAIGRIDEEKPCDFDEEDVKVKTN-VYPRSRSYAVSKR 158


>ref|XP_003634344.1| PREDICTED: uncharacterized protein LOC100267722 [Vitis vinifera]
          Length = 149

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 53/119 (44%), Positives = 79/119 (66%), Gaps = 2/119 (1%)
 Frame = -1

Query: 382 LTDCSGRMSEASVIGYPGGSVNIVPRSFSVNSSRSNDDEDIKELMRAASQRGLREKLEME 203
           +T+C+ R    + +G P G    +PRS+S  SSRSND+ED +EL+RAAS   L   +++ 
Sbjct: 33  MTNCATR-GYGNNMGGPAG----MPRSYSYASSRSNDNEDFRELVRAASVNTLGHGVDLN 87

Query: 202 IQQLQQLSKKTDALPRSRTVAIGRIDEDKPC-DFDE-DLETKPDLLYPRSKSYAVSKKN 32
               Q  ++K+  +PRS +V + RIDED PC DF E + + K DL+YPRS+SYAV+K++
Sbjct: 88  ALLQQSAAEKSKVVPRSCSVGMARIDEDGPCNDFGEVNFKAKADLMYPRSRSYAVTKRS 146


>ref|XP_002525295.1| conserved hypothetical protein [Ricinus communis]
           gi|223535453|gb|EEF37123.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 164

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 53/131 (40%), Positives = 88/131 (67%), Gaps = 9/131 (6%)
 Frame = -1

Query: 382 LTDCSGRMSEASVIGYPGGSV-NIVPRSFSVNSSRSND-DEDIKELMRAASQRGLREKLE 209
           +T+ S R+   + +G P G V   +P+S+SVNS++S+  D+D +EL+RAAS RGL  + +
Sbjct: 35  MTEYSDRIGYGTFMGCPTGHVVETLPKSYSVNSTKSSSRDDDYRELLRAASTRGLSSRND 94

Query: 208 MEIQQLQQLSKKTD------ALPRSRTVAIGRIDEDKPCDFDEDLETKPDLLYPRSKSYA 47
           + + Q QQ  K  +      ++PRS +V IGRIDE+K CD  +D++ K D ++PRS+S+A
Sbjct: 95  LGVLQRQQSRKSPNNTRANISMPRSHSVGIGRIDEEKACDNFDDIKVKTD-VFPRSRSHA 153

Query: 46  VS-KKNTSKLW 17
           VS  + T++++
Sbjct: 154 VSATRRTTRMY 164


>ref|XP_002310332.1| predicted protein [Populus trichocarpa] gi|222853235|gb|EEE90782.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 52/121 (42%), Positives = 79/121 (65%), Gaps = 13/121 (10%)
 Frame = -1

Query: 346 VIGYPGGSVNIVPRSFSVNSSRSND-DEDIKELMRAASQRG---------LREKLEMEIQ 197
           V+  P G++N +PRS+SV+SS+SN  D+D +EL+RAAS R          +R + +  I+
Sbjct: 44  VMSNPTGNLNNMPRSYSVSSSKSNHFDDDYRELIRAASTRSTLGRSNNMDVRARQQYIIR 103

Query: 196 QLQQLSKKTDALPRSRTVAIGRIDED-KPCDFDED--LETKPDLLYPRSKSYAVSKKNTS 26
             +  ++  D + RSR+V IGRIDE+   CDFDED  ++ K   +YPRS+SYAVSK+  +
Sbjct: 104 DKKSAAEVADNMSRSRSVVIGRIDEETSTCDFDEDQDVKAKTGQVYPRSRSYAVSKRTPT 163

Query: 25  K 23
           +
Sbjct: 164 R 164


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