BLASTX nr result

ID: Coptis23_contig00035593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035593
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270193.1| PREDICTED: dnaJ homolog subfamily B member 1...   114   8e-24
ref|XP_003523046.1| PREDICTED: dnaJ homolog subfamily B member 1...   102   4e-20
ref|XP_003527055.1| PREDICTED: dnaJ homolog subfamily B member 1...    99   5e-19
ref|XP_003527054.1| PREDICTED: dnaJ homolog subfamily B member 1...    99   5e-19
ref|XP_002322128.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17

>ref|XP_002270193.1| PREDICTED: dnaJ homolog subfamily B member 13-like isoform 1 [Vitis
           vinifera]
          Length = 339

 Score =  114 bits (285), Expect = 8e-24
 Identities = 66/114 (57%), Positives = 73/114 (64%), Gaps = 11/114 (9%)
 Frame = -3

Query: 317 QIYDQFGEEALKSGQVPPPPSSFRNNNTNTATTSGLHPNSSYRFNPRNADDIYNELFGNS 138
           QIYD +GEEALKSGQVPPPP+S R    +       HPN S+RFNPR+ADDIY E FG  
Sbjct: 64  QIYDLYGEEALKSGQVPPPPASTRGGPQH----HNHHPNPSFRFNPRDADDIYEEFFGPD 119

Query: 137 GSDF------GGRR---ADGFFRTSNNT--GDALRKAPIMENRLPCSLEDLYLG 9
           GS        GGR     DGFFRTSN      ALRKA  +EN LPCSLE+LY G
Sbjct: 120 GSGTGAGGGGGGRNRVYKDGFFRTSNGDYGSQALRKAAPVENLLPCSLEELYKG 173


>ref|XP_003523046.1| PREDICTED: dnaJ homolog subfamily B member 1-like [Glycine max]
          Length = 351

 Score =  102 bits (253), Expect = 4e-20
 Identities = 65/127 (51%), Positives = 69/127 (54%), Gaps = 24/127 (18%)
 Frame = -3

Query: 317 QIYDQFGEEALKSGQVPPPPSSF-----------------RNNNTNTATTSGLHPN-SSY 192
           QIYD +GEEALKSGQ PPP SS                   NNN N    S   P  SS+
Sbjct: 64  QIYDLYGEEALKSGQFPPPHSSSSSSSSRAFHHRQNNNNNNNNNNNNKNNSNPPPAASSF 123

Query: 191 RFNPRNADDIYNELFGNSGSDFGGRRADGFFRTSNNTG------DALRKAPIMENRLPCS 30
           RFNPR+ADDIY E FG    D G    D FFRTSN  G       A RKA  +EN LPCS
Sbjct: 124 RFNPRDADDIYAEFFG--PEDIGAGGPDAFFRTSNGGGAFGASAAAGRKAAAVENALPCS 181

Query: 29  LEDLYLG 9
           LEDLY G
Sbjct: 182 LEDLYKG 188


>ref|XP_003527055.1| PREDICTED: dnaJ homolog subfamily B member 13-like isoform 2
           [Glycine max]
          Length = 351

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 64/131 (48%), Positives = 72/131 (54%), Gaps = 28/131 (21%)
 Frame = -3

Query: 317 QIYDQFGEEALKSGQVPPPPSSF----------------RNNNTNTATTSGLHPNSSYRF 186
           QIYD +GEEALKSGQ PPPP S                 +NNN   A+       SS+RF
Sbjct: 64  QIYDLYGEEALKSGQFPPPPQSSSSSSSRAFHHHHHHHRQNNNPPPASA------SSFRF 117

Query: 185 NPRNADDIYNELFG--NSGSDFGGRRA---DGFFRTSNNTGDAL-------RKAPIMENR 42
           NPR+ADDIY E FG  + G+    RR    D FFRTSN  G A        RKA  +EN 
Sbjct: 118 NPRDADDIYAEFFGPDDIGAGASSRRGGGPDAFFRTSNGGGAAFSASAAAGRKAAAVENA 177

Query: 41  LPCSLEDLYLG 9
           LPCSLEDLY G
Sbjct: 178 LPCSLEDLYKG 188


>ref|XP_003527054.1| PREDICTED: dnaJ homolog subfamily B member 13-like isoform 1
           [Glycine max]
          Length = 351

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 64/131 (48%), Positives = 72/131 (54%), Gaps = 28/131 (21%)
 Frame = -3

Query: 317 QIYDQFGEEALKSGQVPPPPSSF----------------RNNNTNTATTSGLHPNSSYRF 186
           QIYD +GEEALKSGQ PPPP S                 +NNN   A+       SS+RF
Sbjct: 64  QIYDLYGEEALKSGQFPPPPQSSSSSSSRAFHHHHHHHRQNNNPPPASA------SSFRF 117

Query: 185 NPRNADDIYNELFG--NSGSDFGGRRA---DGFFRTSNNTGDAL-------RKAPIMENR 42
           NPR+ADDIY E FG  + G+    RR    D FFRTSN  G A        RKA  +EN 
Sbjct: 118 NPRDADDIYAEFFGPDDIGAGASSRRGGGPDAFFRTSNGGGAAFSASAAAGRKAAAVENA 177

Query: 41  LPCSLEDLYLG 9
           LPCSLEDLY G
Sbjct: 178 LPCSLEDLYKG 188


>ref|XP_002322128.1| predicted protein [Populus trichocarpa] gi|222869124|gb|EEF06255.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 54/121 (44%), Positives = 65/121 (53%), Gaps = 16/121 (13%)
 Frame = -3

Query: 317 QIYDQFGEEALKSGQVPPPPSSFRNNNTNTATTSGLHPNSSYRFNPRNADDIYNELFGNS 138
           QIYD +GEE LKSGQ PPP  S     T+       HPN S+RF PRNA+DIY ELFG+ 
Sbjct: 65  QIYDLYGEEGLKSGQCPPPSPS-----TSRHYFQRQHPNPSFRFKPRNAEDIYEELFGSE 119

Query: 137 GSDFGGRR----ADGFFRTSNN------------TGDALRKAPIMENRLPCSLEDLYLGT 6
               GG      + G FR + N             G  ++K   +EN LPCSLE+LY G 
Sbjct: 120 SGGGGGNERGNYSRGHFRNNTNNSSSSSSSSYFGNGGDMKKPNAIENLLPCSLEELYKGA 179

Query: 5   T 3
           T
Sbjct: 180 T 180


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