BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035577
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...    62   4e-08
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...    62   4e-08
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    62   6e-08
gb|EEC76821.1| hypothetical protein OsI_14959 [Oryza sativa Indi...    62   6e-08
gb|EEC77009.1| hypothetical protein OsI_15342 [Oryza sativa Indi...    61   1e-07

>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
           Japonica Group]
          Length = 1382

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/94 (35%), Positives = 51/94 (54%)
 Frame = +2

Query: 2   FNAITSLHEKIGGKSLFSKCMIDFNAFINDLGLLDMGNKGPKFTWLNNRRFKDHVLERLD 181
           FN +  L E +G +      M  F + ++D GL+D+G  GPKFTW N +    +   RLD
Sbjct: 143 FNEVLCLDEHLGMRERSEPHMQHFRSCLDDCGLIDLGFVGPKFTWSNKQDANSNSKVRLD 202

Query: 182 RVIATPD*LEMFPHASVKSVV*ATSDHLALNIIL 283
           R +A  +    F    V++V+  +SDH A++I L
Sbjct: 203 RAVANGEFSRYFEDCLVENVITTSSDHYAISIDL 236


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
           protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/94 (35%), Positives = 51/94 (54%)
 Frame = +2

Query: 2   FNAITSLHEKIGGKSLFSKCMIDFNAFINDLGLLDMGNKGPKFTWLNNRRFKDHVLERLD 181
           FN +  L E +G +      M  F + ++D GL+D+G  GPKFTW N +    +   RLD
Sbjct: 100 FNEVLCLDEHLGMRERSEPHMQHFRSCLDDCGLIDLGFVGPKFTWSNKQDANSNSKVRLD 159

Query: 182 RVIATPD*LEMFPHASVKSVV*ATSDHLALNIIL 283
           R +A  +    F    V++V+  +SDH A++I L
Sbjct: 160 RAVANGEFSRYFEDCLVENVITTSSDHYAISIDL 193


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
 Frame = +2

Query: 2   FNAITSLHEKIGGKSLFSKCMIDFNAFINDLGLLDMGNKGPKFTWLNNRRFKD-HVLERL 178
           FN I   HEK GG+      M +F   + D GL D+G +G  FTW N+   ++ ++ ERL
Sbjct: 384 FNEILFSHEKQGGRMKAQSAMDEFRHALTDCGLDDLGFEGDAFTWRNHSHSQEGYIRERL 443

Query: 179 DRVIATPD*LEMFPHASVKSVV*ATSDHLALNIILK 286
           DR +A P+   MFP A V +     SDH  + I L+
Sbjct: 444 DRAVANPEWRAMFPAARVINGDPRHSDHRPVIIELE 479


>gb|EEC76821.1| hypothetical protein OsI_14959 [Oryza sativa Indica Group]
          Length = 405

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/93 (37%), Positives = 51/93 (54%)
 Frame = +2

Query: 5   NAITSLHEKIGGKSLFSKCMIDFNAFINDLGLLDMGNKGPKFTWLNNRRFKDHVLERLDR 184
           N I   +EK+    + S  +  F   I++LGL+D+G  GP +TW N +   D VLERLDR
Sbjct: 5   NDIMYDNEKLSCSPVNSSRISQFPRHIHNLGLIDLGYNGPAYTWSNKKNGCDLVLERLDR 64

Query: 185 VIATPD*LEMFPHASVKSVV*ATSDHLALNIIL 283
            +A  +   +FPH +V  +    SDH  +  IL
Sbjct: 65  CLANVEWCMLFPHTTVYHLPMLYSDHAPIIAIL 97


>gb|EEC77009.1| hypothetical protein OsI_15342 [Oryza sativa Indica Group]
          Length = 815

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/93 (35%), Positives = 51/93 (54%)
 Frame = +2

Query: 5   NAITSLHEKIGGKSLFSKCMIDFNAFINDLGLLDMGNKGPKFTWLNNRRFKDHVLERLDR 184
           N I  ++EK G        +  F  ++N++GL+D+G  GP +TW N +  KD VL+RLDR
Sbjct: 5   NEIMHVNEKFGSVPPNQVRINIFKHYVNNIGLMDLGYNGPAYTWSNKQHGKDLVLQRLDR 64

Query: 185 VIATPD*LEMFPHASVKSVV*ATSDHLALNIIL 283
            +A  +    FP+ +V  +    SDH  +  IL
Sbjct: 65  CLANVEWCMNFPNTTVYHLPMLYSDHAPIIAIL 97