BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035550
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285282.1| PREDICTED: interferon-related developmental ...   115   4e-24
ref|XP_002301151.1| predicted protein [Populus trichocarpa] gi|2...   104   9e-21
ref|XP_002320034.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002510104.1| conserved hypothetical protein [Ricinus comm...   100   1e-19
ref|XP_004141288.1| PREDICTED: interferon-related developmental ...    96   2e-18

>ref|XP_002285282.1| PREDICTED: interferon-related developmental regulator 1 [Vitis
           vinifera] gi|302142206|emb|CBI19409.3| unnamed protein
           product [Vitis vinifera]
          Length = 446

 Score =  115 bits (288), Expect = 4e-24
 Identities = 65/130 (50%), Positives = 84/130 (64%), Gaps = 7/130 (5%)
 Frame = -2

Query: 370 NNVEETERSMQDMWQFIHPKEGSDVI----DXXXXXXXXXXXSFLLATMHSWSINSKLWK 203
           N+ EETERSMQ MWQ +HPK GS+V+                SFLL TM  W +N K W+
Sbjct: 167 NDPEETERSMQIMWQLLHPKLGSNVVARKPSAEVITAVVSAWSFLLTTMDGWKLNPKNWQ 226

Query: 202 ESLSYFSNLLYMDDLSIQMAVGEALALIFEIGNLPKFSNETKMLTGTSVHEQS---EGNA 32
            S+SYFS+LL  DD S+++A GEALALIFE+G+L KF  E K  + +S+HE++   EG  
Sbjct: 227 GSISYFSSLLDKDDRSVRIAAGEALALIFEVGSLEKFFIEPKGPSDSSIHEENIHREGFT 286

Query: 31  SIEGLKDTIL 2
            I+GLK  IL
Sbjct: 287 HIQGLKGKIL 296


>ref|XP_002301151.1| predicted protein [Populus trichocarpa] gi|222842877|gb|EEE80424.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score =  104 bits (259), Expect = 9e-21
 Identities = 62/130 (47%), Positives = 78/130 (60%), Gaps = 7/130 (5%)
 Frame = -2

Query: 370 NNVEETERSMQDMWQFIHPKEGSDVI----DXXXXXXXXXXXSFLLATMHSWSINSKLWK 203
           N  EETERSMQ MWQ +HPK GS+V+                +FLL TM   S+NSK W+
Sbjct: 159 NETEETERSMQIMWQLLHPKLGSNVVAVKTPAVVVTAVVSAWAFLLTTMDGCSLNSKDWQ 218

Query: 202 ESLSYFSNLLYMDDLSIQMAVGEALALIFEIGNLPKFSNETKMLTGTSV---HEQSEGNA 32
           ES+SY S LL  DD S++++ GEALALIFE G++ KF+ E K     SV   ++  EG  
Sbjct: 219 ESISYLSTLLDKDDRSVRISAGEALALIFETGSIEKFAAENKTPPDGSVLEGNKSCEGYT 278

Query: 31  SIEGLKDTIL 2
            I GLK  IL
Sbjct: 279 RILGLKSKIL 288


>ref|XP_002320034.1| predicted protein [Populus trichocarpa] gi|222860807|gb|EEE98349.1|
           predicted protein [Populus trichocarpa]
          Length = 430

 Score =  103 bits (258), Expect = 1e-20
 Identities = 62/127 (48%), Positives = 76/127 (59%), Gaps = 7/127 (5%)
 Frame = -2

Query: 361 EETERSMQDMWQFIHPKEGSDVI----DXXXXXXXXXXXSFLLATMHSWSINSKLWKESL 194
           EETERSMQ MWQ +HPK GS+V+                +F+L TM   S+NSK W+E +
Sbjct: 155 EETERSMQIMWQLLHPKLGSNVVAVKLSAVVITAVVSAWAFILTTMDGCSLNSKDWQEYI 214

Query: 193 SYFSNLLYMDDLSIQMAVGEALALIFEIGNLPKFSNETKMLTGTSVHE---QSEGNASIE 23
           SYFS LL  DD S+++A GEALALIFE G++ KF+ E K     SV E     EG   I 
Sbjct: 215 SYFSTLLDKDDRSVRIASGEALALIFETGSIEKFATENKTTPDGSVPEGNKSREGYTHIL 274

Query: 22  GLKDTIL 2
           GLK  IL
Sbjct: 275 GLKSKIL 281


>ref|XP_002510104.1| conserved hypothetical protein [Ricinus communis]
           gi|223550805|gb|EEF52291.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 448

 Score =  100 bits (249), Expect = 1e-19
 Identities = 60/130 (46%), Positives = 75/130 (57%), Gaps = 7/130 (5%)
 Frame = -2

Query: 370 NNVEETERSMQDMWQFIHPKEGSDVI----DXXXXXXXXXXXSFLLATMHSWSINSKLWK 203
           N   ETERSMQ MWQ + PK GS+V                 +FLL TM  W I+ K W+
Sbjct: 169 NEPTETERSMQIMWQLVRPKLGSNVAAAKPSAPVIAAVVSAWAFLLTTMDGWKIDPKDWQ 228

Query: 202 ESLSYFSNLLYMDDLSIQMAVGEALALIFEIGNLPKFSNETK---MLTGTSVHEQSEGNA 32
           ES+SY S LL  DD S+++A GEALALIFEIG+L KF+ E K    L    V++  E   
Sbjct: 229 ESISYLSGLLDKDDRSVRIAAGEALALIFEIGSLEKFAGENKDSDDLPVQGVNKSREVMV 288

Query: 31  SIEGLKDTIL 2
            I+GLK  +L
Sbjct: 289 HIQGLKSKVL 298


>ref|XP_004141288.1| PREDICTED: interferon-related developmental regulator 1-like
           [Cucumis sativus]
          Length = 442

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 61/130 (46%), Positives = 78/130 (60%), Gaps = 7/130 (5%)
 Frame = -2

Query: 370 NNVEETERSMQDMWQFIHPKEGSDVI----DXXXXXXXXXXXSFLLATMHSWSINSKLWK 203
           N++EE ERS+Q MWQ + PK G +V+                SF+L TM    +NSK W+
Sbjct: 166 NDIEEIERSLQLMWQVVIPKLGQNVVAVRQSAAIITAMVSSWSFVLTTMDGLKLNSKDWQ 225

Query: 202 ESLSYFSNLLYMDDLSIQMAVGEALALIFEIGNLPKFSNETKMLTGTSVHEQS---EGNA 32
           ES+S+ S+LL  DD ++++A GEALALIFEIG L KFS ETK  T  S  E S   E   
Sbjct: 226 ESISFLSSLLDKDDRAVRIAAGEALALIFEIGILEKFSAETKGSTDGSTLEGSKPREWFI 285

Query: 31  SIEGLKDTIL 2
            I+GLK  IL
Sbjct: 286 HIQGLKGKIL 295