BLASTX nr result

ID: Coptis23_contig00035536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035536
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523518.1| PREDICTED: probable LRR receptor-like serine...   168   5e-40
ref|XP_003631657.1| PREDICTED: probable LRR receptor-like serine...   165   4e-39
ref|XP_003527625.1| PREDICTED: probable LRR receptor-like serine...   163   2e-38
ref|XP_002313045.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_002509489.1| lrr receptor protein kinase, putative [Ricin...   162   3e-38

>ref|XP_003523518.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At2g16250-like [Glycine max]
          Length = 900

 Score =  168 bits (425), Expect = 5e-40
 Identities = 83/136 (61%), Positives = 100/136 (73%), Gaps = 3/136 (2%)
 Frame = -3

Query: 400 LEFVVLSHNLLSGTLPDVLWSMPALRFLDVSYNNFTNVLPNTNSSGNAAT---FNLSHNK 230
           L+F+VL  N  SG+LP  LWS+P L FLDVS NNF+ +LPN++S+ N AT    N+SHNK
Sbjct: 290 LQFLVLRQNNFSGSLPVELWSLPRLSFLDVSANNFSGLLPNSSSAANNATVAVLNISHNK 349

Query: 229 FFGNLTSQVRRFSFIDLSDNYFEGRVVADIGRNAFLSTNCLQNVTNQRSLRDCTLFYSER 50
           F+G LT  +RRF+F+DLS NYFEG+V+ D  RN  L  NCLQN TNQRS   C  FY+ER
Sbjct: 350 FYGGLTPALRRFAFVDLSSNYFEGKVL-DFMRNVSLDINCLQNATNQRSTVKCASFYAER 408

Query: 49  GLIFDNFGNPNTTSPP 2
           GL FDNFG PNTT PP
Sbjct: 409 GLSFDNFGRPNTTKPP 424


>ref|XP_003631657.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At2g16250-like [Vitis vinifera]
          Length = 908

 Score =  165 bits (417), Expect = 4e-39
 Identities = 84/137 (61%), Positives = 99/137 (72%), Gaps = 2/137 (1%)
 Frame = -3

Query: 409 LTQLEFVVLSHNLLSGTLPDVLWSMPALRFLDVSYNNFTNVLPNTNSSGNA--ATFNLSH 236
           L+QL+ VVLS N  +G LPDVLW+MP L FLDVS NNFT+VLPN + +GNA  + FNLS 
Sbjct: 298 LSQLQLVVLSQNAFTGNLPDVLWTMPNLSFLDVSGNNFTSVLPNFSFNGNATASVFNLSQ 357

Query: 235 NKFFGNLTSQVRRFSFIDLSDNYFEGRVVADIGRNAFLSTNCLQNVTNQRSLRDCTLFYS 56
           N F+G L S  RRFS ID+S NYFEGRV      NA    NCLQNV+NQR+L  C  FY+
Sbjct: 358 NMFYGGLPSLPRRFSSIDMSQNYFEGRVRDYAPSNASFGMNCLQNVSNQRTLEVCASFYA 417

Query: 55  ERGLIFDNFGNPNTTSP 5
           E+GL FDNFG PN+T P
Sbjct: 418 EKGLPFDNFGQPNSTQP 434


>ref|XP_003527625.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At2g16250-like [Glycine max]
          Length = 898

 Score =  163 bits (412), Expect = 2e-38
 Identities = 80/136 (58%), Positives = 97/136 (71%), Gaps = 3/136 (2%)
 Frame = -3

Query: 400 LEFVVLSHNLLSGTLPDVLWSMPALRFLDVSYNNFTNVLPNTNSSGN---AATFNLSHNK 230
           L+F+VL  N  SG+LP  LWS+P L FLDVS NNF+ +LPN+ S+ N   AA  N+SHNK
Sbjct: 290 LQFLVLRQNNFSGSLPVELWSLPRLSFLDVSANNFSGLLPNSTSAANNATAAVLNISHNK 349

Query: 229 FFGNLTSQVRRFSFIDLSDNYFEGRVVADIGRNAFLSTNCLQNVTNQRSLRDCTLFYSER 50
           F+G LT  +RRF F+DLS NYFEG+++ D   N  L  NCLQ  TNQRS  +C  FY+ER
Sbjct: 350 FYGGLTPALRRFGFVDLSRNYFEGKIL-DYMLNVSLDINCLQKATNQRSTMECASFYAER 408

Query: 49  GLIFDNFGNPNTTSPP 2
           GL FDNFG PNTT PP
Sbjct: 409 GLSFDNFGQPNTTKPP 424


>ref|XP_002313045.1| predicted protein [Populus trichocarpa] gi|222849453|gb|EEE87000.1|
           predicted protein [Populus trichocarpa]
          Length = 893

 Score =  162 bits (410), Expect = 3e-38
 Identities = 81/137 (59%), Positives = 99/137 (72%), Gaps = 2/137 (1%)
 Frame = -3

Query: 406 TQLEFVVLSHNLLSGTLPDVLWSMPALRFLDVSYNNFTNVLPNTNSSGNAAT--FNLSHN 233
           +QL+ VVL  N   G +PDVLWSMP LR LD+S NNFT +L N + + N  T   N+S N
Sbjct: 297 SQLQTVVLKSNGFIGAVPDVLWSMPRLRLLDISGNNFTGMLSNASLNTNTTTAELNVSQN 356

Query: 232 KFFGNLTSQVRRFSFIDLSDNYFEGRVVADIGRNAFLSTNCLQNVTNQRSLRDCTLFYSE 53
            F+G LT  +RRFSF+DLS NYFEGRV   +  NA L +NCLQN++NQRSL  CT FY+E
Sbjct: 357 LFYGGLTPVLRRFSFVDLSGNYFEGRVPDYVSDNASLVSNCLQNLSNQRSLLGCTSFYTE 416

Query: 52  RGLIFDNFGNPNTTSPP 2
           +GLIFDNFG PN+T PP
Sbjct: 417 KGLIFDNFGLPNSTQPP 433


>ref|XP_002509489.1| lrr receptor protein kinase, putative [Ricinus communis]
           gi|223549388|gb|EEF50876.1| lrr receptor protein kinase,
           putative [Ricinus communis]
          Length = 901

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/136 (57%), Positives = 102/136 (75%), Gaps = 2/136 (1%)
 Frame = -3

Query: 403 QLEFVVLSHNLLSGTLPDVLWSMPALRFLDVSYNNFTNVLPNTNSSGNAAT--FNLSHNK 230
           QL+ VV+ +N  +G++P+VLW+MP L FLD+S NNFT +LPN   + N +T   N+S N 
Sbjct: 296 QLQIVVMKNNGFTGSVPNVLWTMPGLSFLDISGNNFTGLLPNVTFNANTSTAELNISGNL 355

Query: 229 FFGNLTSQVRRFSFIDLSDNYFEGRVVADIGRNAFLSTNCLQNVTNQRSLRDCTLFYSER 50
            +G L   +RRFSF+DLS NYFEG+V+  +  NA L +NCLQNV+NQRSL +CT FY+ER
Sbjct: 356 LYGFLNPILRRFSFVDLSGNYFEGKVLDLVPDNASLLSNCLQNVSNQRSLSECTSFYAER 415

Query: 49  GLIFDNFGNPNTTSPP 2
           GLIFDNFG PN+T PP
Sbjct: 416 GLIFDNFGLPNSTQPP 431


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