BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035535
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
emb|CBI30808.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|NP_001044643.1| Os01g0819800 [Oryza sativa Japonica Group] g...   103   1e-20
ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
gb|EAZ35608.1| hypothetical protein OsJ_19898 [Oryza sativa Japo...   103   1e-20

>ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/82 (62%), Positives = 61/82 (74%)
 Frame = +3

Query: 3   CSHSRMLDKGKYFFEQLNRDPSVEVKLEHYTCMVDILGRSGRLEEAEEFILRMPVKADFA 182
           CSHS M  KG+  F+  + + S EVKL+HY CMVDILGRSG+LEEAEE I  MPVKA+  
Sbjct: 415 CSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSM 474

Query: 183 VWMALLGACKVHSNLDVATRAA 248
           VW+ LL AC +HS L+VA RAA
Sbjct: 475 VWLVLLSACTMHSKLEVAERAA 496


>emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/82 (62%), Positives = 61/82 (74%)
 Frame = +3

Query: 3   CSHSRMLDKGKYFFEQLNRDPSVEVKLEHYTCMVDILGRSGRLEEAEEFILRMPVKADFA 182
           CSHS M  KG+  F+  + + S EVKL+HY CMVDILGRSG+LEEAEE I  MPVKA+  
Sbjct: 399 CSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSM 458

Query: 183 VWMALLGACKVHSNLDVATRAA 248
           VW+ LL AC +HS L+VA RAA
Sbjct: 459 VWLVLLSACTMHSKLEVAERAA 480


>ref|NP_001044643.1| Os01g0819800 [Oryza sativa Japonica Group]
           gi|21104789|dbj|BAB93376.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113534174|dbj|BAF06557.1| Os01g0819800 [Oryza
           sativa Japonica Group]
          Length = 646

 Score =  103 bits (257), Expect = 1e-20
 Identities = 46/81 (56%), Positives = 60/81 (74%)
 Frame = +3

Query: 3   CSHSRMLDKGKYFFEQLNRDPSVEVKLEHYTCMVDILGRSGRLEEAEEFILRMPVKADFA 182
           CSH+ M D+G+ +F  + RD  +  KLEHYTCMVD+LGR+GRL+EA E I  MP+ AD A
Sbjct: 384 CSHAGMYDEGRKYFSTMERDYCLRPKLEHYTCMVDLLGRAGRLDEARELIASMPMAADGA 443

Query: 183 VWMALLGACKVHSNLDVATRA 245
           VW ALLGACK+H N+++   A
Sbjct: 444 VWGALLGACKIHKNVEMGEEA 464


>ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Glycine max]
          Length = 622

 Score =  103 bits (257), Expect = 1e-20
 Identities = 43/80 (53%), Positives = 62/80 (77%)
 Frame = +3

Query: 3   CSHSRMLDKGKYFFEQLNRDPSVEVKLEHYTCMVDILGRSGRLEEAEEFILRMPVKADFA 182
           CSH+ M+++G   FE + RD  VE +LEHY CMVD+LGR+G+L +AE+F+L+MPVK +  
Sbjct: 360 CSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAP 419

Query: 183 VWMALLGACKVHSNLDVATR 242
           +W ALLGAC++H N++V  R
Sbjct: 420 IWRALLGACRIHKNVEVGER 439


>gb|EAZ35608.1| hypothetical protein OsJ_19898 [Oryza sativa Japonica Group]
          Length = 602

 Score =  103 bits (257), Expect = 1e-20
 Identities = 46/81 (56%), Positives = 60/81 (74%)
 Frame = +3

Query: 3   CSHSRMLDKGKYFFEQLNRDPSVEVKLEHYTCMVDILGRSGRLEEAEEFILRMPVKADFA 182
           CSH+ M D+G+ +F  + RD  +  KLEHYTCMVD+LGR+GRL+EA E I  MP+ AD A
Sbjct: 340 CSHAGMYDEGRKYFSTMERDYCLRPKLEHYTCMVDLLGRAGRLDEARELIASMPMAADGA 399

Query: 183 VWMALLGACKVHSNLDVATRA 245
           VW ALLGACK+H N+++   A
Sbjct: 400 VWGALLGACKIHKNVEMGEEA 420