BLASTX nr result

ID: Coptis23_contig00035492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035492
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279326.1| PREDICTED: uncharacterized protein LOC100241...   103   1e-20
ref|XP_002329836.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002305118.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
gb|ACU18937.1| unknown [Glycine max]                                   85   7e-15
ref|XP_003529347.1| PREDICTED: uncharacterized protein LOC100793...    84   2e-14

>ref|XP_002279326.1| PREDICTED: uncharacterized protein LOC100241906 [Vitis vinifera]
           gi|297740424|emb|CBI30606.3| unnamed protein product
           [Vitis vinifera]
          Length = 142

 Score =  103 bits (257), Expect = 1e-20
 Identities = 63/136 (46%), Positives = 78/136 (57%), Gaps = 3/136 (2%)
 Frame = +3

Query: 3   EMSNGWPLGLETMNLRLRVMESLQAAAAEPNHPFSVCXXXXXXXXXXXXXXXXXKSFFQD 182
           EM +GWPLGLE MN RLRV ESLQA+A EP H   +                   SFFQD
Sbjct: 7   EMPSGWPLGLEIMNTRLRVAESLQASAVEP-HTLHMPSTSFSSFSSSNLDTESTASFFQD 65

Query: 183 GSVSLGRIIRIRPGDGD--LYFTNSIHHGECRQVIGRSA-ASDSFRSHEGTVCRGVCIPL 353
            SV LGR+I IR GDG   LYFTN +   E  +   R A   D  R H   + +G+CIPL
Sbjct: 66  HSVPLGRLIGIRSGDGSGGLYFTNRMRFNERERASARGAHPPDPSRGHSMELSQGICIPL 125

Query: 354 LQCVLVKISPNRNSSR 401
           L  +LVK++ +++SSR
Sbjct: 126 LLGILVKMNRSKSSSR 141


>ref|XP_002329836.1| predicted protein [Populus trichocarpa] gi|222870898|gb|EEF08029.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 61/138 (44%), Positives = 80/138 (57%), Gaps = 4/138 (2%)
 Frame = +3

Query: 3   EMSNGWPLGLETMNLRLRVMESLQAAAAEPNHPFSVCXXXXXXXXXXXXXXXXXKSFFQD 182
           E SNGWPLGL  MN RLRVMES+QAA  EP +   +                   SFFQD
Sbjct: 7   ETSNGWPLGL--MNTRLRVMESIQAAPVEP-YSLRIRSSSFSSFSSSNLDTESSASFFQD 63

Query: 183 GSVSLGRIIRIRPGDGDLYFTNSIHHGECRQVIG----RSAASDSFRSHEGTVCRGVCIP 350
            SV LGR+I IRPG+G LYF   +H  E R+ IG    R+A+S+   +    + +G+CIP
Sbjct: 64  NSVPLGRLIGIRPGNGALYFPRRVHVDE-REKIGIRAIRAASSEVSGARRADMSQGICIP 122

Query: 351 LLQCVLVKISPNRNSSRR 404
           LL   L K+S +++ SR+
Sbjct: 123 LLFGTLEKMSRSKSKSRQ 140


>ref|XP_002305118.1| predicted protein [Populus trichocarpa] gi|222848082|gb|EEE85629.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 57/137 (41%), Positives = 78/137 (56%), Gaps = 3/137 (2%)
 Frame = +3

Query: 3   EMSNGWPLGLETMNLRLRVMESLQAAAAEPNHPFSVCXXXXXXXXXXXXXXXXXKSFFQD 182
           E SNGWPLGL  M+ RLRVME++QAA AEP +   +                   SFFQD
Sbjct: 7   EASNGWPLGL--MSTRLRVMETIQAAPAEP-YSLRIRSSSFSSFSSSNLDTESTASFFQD 63

Query: 183 GSVSLGRIIRIRPGDGDLYFTNSIHHGECRQVIG---RSAASDSFRSHEGTVCRGVCIPL 353
            SV LGR+I IRPG+G LYF   +H  E  ++     R+A+S+   +    +  G+CIPL
Sbjct: 64  KSVPLGRLIGIRPGNGGLYFPRRVHADEQGKIAVRAIRAASSEVSGARRADMSHGICIPL 123

Query: 354 LQCVLVKISPNRNSSRR 404
           L   L K+S +++ SR+
Sbjct: 124 LAGTLEKMSRSKSKSRQ 140


>gb|ACU18937.1| unknown [Glycine max]
          Length = 143

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 55/136 (40%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
 Frame = +3

Query: 3   EMSNGWPLGLETMNLRLRVMESLQAAAAEPNHPFSVCXXXXXXXXXXXXXXXXXKSFFQD 182
           EM  GWP GL  +N+RLR  ESL AA  EP H   V                   SFFQD
Sbjct: 7   EMPIGWPFGLGFLNMRLRDAESLPAAPVEP-HSMHVPSTSFSSFSSSNLDTESTASFFQD 65

Query: 183 GSVSLGRIIRIRPGD-GDLYFTNSIHHGE---CRQVIGRSAASDSFRSHEGTVCRGVCIP 350
            SVSLG +I +RPG+ G LYF N++   E    + +   S + D+F   E  + RG+C P
Sbjct: 66  NSVSLGHLIGLRPGEKGSLYFPNTLRLEEREKKKALANGSCSHDAFEVKEVDMSRGICTP 125

Query: 351 LLQCVLVKISPNRNSS 398
           +L   L+KIS  + SS
Sbjct: 126 ILLEALLKISKCKKSS 141


>ref|XP_003529347.1| PREDICTED: uncharacterized protein LOC100793283 [Glycine max]
          Length = 143

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 55/136 (40%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
 Frame = +3

Query: 3   EMSNGWPLGLETMNLRLRVMESLQAAAAEPNHPFSVCXXXXXXXXXXXXXXXXXKSFFQD 182
           EM  GWP GL  +N+RLR  ESL AA  EP H   V                   SFFQD
Sbjct: 7   EMPIGWPFGLGFLNMRLRDAESLPAAPVEP-HSMHVPSTSFSSFSSSNLDTESTASFFQD 65

Query: 183 GSVSLGRIIRIRPGD-GDLYFTNSIHHGE---CRQVIGRSAASDSFRSHEGTVCRGVCIP 350
            SVSLG +I +RPG+ G LYF N++   E    + +   S + D+    E  + RG+CIP
Sbjct: 66  NSVSLGHLIGLRPGEKGSLYFPNTLRLEEREKKKTLANGSCSHDASEVKEVDMSRGICIP 125

Query: 351 LLQCVLVKISPNRNSS 398
           +L   L+KIS  + SS
Sbjct: 126 ILLEALLKISKCKKSS 141


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