BLASTX nr result
ID: Coptis23_contig00035492
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00035492 (482 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279326.1| PREDICTED: uncharacterized protein LOC100241... 103 1e-20 ref|XP_002329836.1| predicted protein [Populus trichocarpa] gi|2... 97 2e-18 ref|XP_002305118.1| predicted protein [Populus trichocarpa] gi|2... 93 3e-17 gb|ACU18937.1| unknown [Glycine max] 85 7e-15 ref|XP_003529347.1| PREDICTED: uncharacterized protein LOC100793... 84 2e-14 >ref|XP_002279326.1| PREDICTED: uncharacterized protein LOC100241906 [Vitis vinifera] gi|297740424|emb|CBI30606.3| unnamed protein product [Vitis vinifera] Length = 142 Score = 103 bits (257), Expect = 1e-20 Identities = 63/136 (46%), Positives = 78/136 (57%), Gaps = 3/136 (2%) Frame = +3 Query: 3 EMSNGWPLGLETMNLRLRVMESLQAAAAEPNHPFSVCXXXXXXXXXXXXXXXXXKSFFQD 182 EM +GWPLGLE MN RLRV ESLQA+A EP H + SFFQD Sbjct: 7 EMPSGWPLGLEIMNTRLRVAESLQASAVEP-HTLHMPSTSFSSFSSSNLDTESTASFFQD 65 Query: 183 GSVSLGRIIRIRPGDGD--LYFTNSIHHGECRQVIGRSA-ASDSFRSHEGTVCRGVCIPL 353 SV LGR+I IR GDG LYFTN + E + R A D R H + +G+CIPL Sbjct: 66 HSVPLGRLIGIRSGDGSGGLYFTNRMRFNERERASARGAHPPDPSRGHSMELSQGICIPL 125 Query: 354 LQCVLVKISPNRNSSR 401 L +LVK++ +++SSR Sbjct: 126 LLGILVKMNRSKSSSR 141 >ref|XP_002329836.1| predicted protein [Populus trichocarpa] gi|222870898|gb|EEF08029.1| predicted protein [Populus trichocarpa] Length = 140 Score = 96.7 bits (239), Expect = 2e-18 Identities = 61/138 (44%), Positives = 80/138 (57%), Gaps = 4/138 (2%) Frame = +3 Query: 3 EMSNGWPLGLETMNLRLRVMESLQAAAAEPNHPFSVCXXXXXXXXXXXXXXXXXKSFFQD 182 E SNGWPLGL MN RLRVMES+QAA EP + + SFFQD Sbjct: 7 ETSNGWPLGL--MNTRLRVMESIQAAPVEP-YSLRIRSSSFSSFSSSNLDTESSASFFQD 63 Query: 183 GSVSLGRIIRIRPGDGDLYFTNSIHHGECRQVIG----RSAASDSFRSHEGTVCRGVCIP 350 SV LGR+I IRPG+G LYF +H E R+ IG R+A+S+ + + +G+CIP Sbjct: 64 NSVPLGRLIGIRPGNGALYFPRRVHVDE-REKIGIRAIRAASSEVSGARRADMSQGICIP 122 Query: 351 LLQCVLVKISPNRNSSRR 404 LL L K+S +++ SR+ Sbjct: 123 LLFGTLEKMSRSKSKSRQ 140 >ref|XP_002305118.1| predicted protein [Populus trichocarpa] gi|222848082|gb|EEE85629.1| predicted protein [Populus trichocarpa] Length = 140 Score = 92.8 bits (229), Expect = 3e-17 Identities = 57/137 (41%), Positives = 78/137 (56%), Gaps = 3/137 (2%) Frame = +3 Query: 3 EMSNGWPLGLETMNLRLRVMESLQAAAAEPNHPFSVCXXXXXXXXXXXXXXXXXKSFFQD 182 E SNGWPLGL M+ RLRVME++QAA AEP + + SFFQD Sbjct: 7 EASNGWPLGL--MSTRLRVMETIQAAPAEP-YSLRIRSSSFSSFSSSNLDTESTASFFQD 63 Query: 183 GSVSLGRIIRIRPGDGDLYFTNSIHHGECRQVIG---RSAASDSFRSHEGTVCRGVCIPL 353 SV LGR+I IRPG+G LYF +H E ++ R+A+S+ + + G+CIPL Sbjct: 64 KSVPLGRLIGIRPGNGGLYFPRRVHADEQGKIAVRAIRAASSEVSGARRADMSHGICIPL 123 Query: 354 LQCVLVKISPNRNSSRR 404 L L K+S +++ SR+ Sbjct: 124 LAGTLEKMSRSKSKSRQ 140 >gb|ACU18937.1| unknown [Glycine max] Length = 143 Score = 84.7 bits (208), Expect = 7e-15 Identities = 55/136 (40%), Positives = 71/136 (52%), Gaps = 4/136 (2%) Frame = +3 Query: 3 EMSNGWPLGLETMNLRLRVMESLQAAAAEPNHPFSVCXXXXXXXXXXXXXXXXXKSFFQD 182 EM GWP GL +N+RLR ESL AA EP H V SFFQD Sbjct: 7 EMPIGWPFGLGFLNMRLRDAESLPAAPVEP-HSMHVPSTSFSSFSSSNLDTESTASFFQD 65 Query: 183 GSVSLGRIIRIRPGD-GDLYFTNSIHHGE---CRQVIGRSAASDSFRSHEGTVCRGVCIP 350 SVSLG +I +RPG+ G LYF N++ E + + S + D+F E + RG+C P Sbjct: 66 NSVSLGHLIGLRPGEKGSLYFPNTLRLEEREKKKALANGSCSHDAFEVKEVDMSRGICTP 125 Query: 351 LLQCVLVKISPNRNSS 398 +L L+KIS + SS Sbjct: 126 ILLEALLKISKCKKSS 141 >ref|XP_003529347.1| PREDICTED: uncharacterized protein LOC100793283 [Glycine max] Length = 143 Score = 83.6 bits (205), Expect = 2e-14 Identities = 55/136 (40%), Positives = 71/136 (52%), Gaps = 4/136 (2%) Frame = +3 Query: 3 EMSNGWPLGLETMNLRLRVMESLQAAAAEPNHPFSVCXXXXXXXXXXXXXXXXXKSFFQD 182 EM GWP GL +N+RLR ESL AA EP H V SFFQD Sbjct: 7 EMPIGWPFGLGFLNMRLRDAESLPAAPVEP-HSMHVPSTSFSSFSSSNLDTESTASFFQD 65 Query: 183 GSVSLGRIIRIRPGD-GDLYFTNSIHHGE---CRQVIGRSAASDSFRSHEGTVCRGVCIP 350 SVSLG +I +RPG+ G LYF N++ E + + S + D+ E + RG+CIP Sbjct: 66 NSVSLGHLIGLRPGEKGSLYFPNTLRLEEREKKKTLANGSCSHDASEVKEVDMSRGICIP 125 Query: 351 LLQCVLVKISPNRNSS 398 +L L+KIS + SS Sbjct: 126 ILLEALLKISKCKKSS 141