BLASTX nr result

ID: Coptis23_contig00035488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035488
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632412.1| PREDICTED: transcription factor UPBEAT1-like...    79   4e-13
ref|XP_002320968.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_002301522.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_003556194.1| PREDICTED: transcription factor UPBEAT1-like...    67   2e-09
ref|XP_002515253.1| transcription factor, putative [Ricinus comm...    61   8e-08

>ref|XP_003632412.1| PREDICTED: transcription factor UPBEAT1-like [Vitis vinifera]
          Length = 121

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 51/113 (45%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
 Frame = -2

Query: 334 MGAPLETLI-SFDAKGMILENNXXXXXXXXXXMWNKAFAAQ-SXXXXXXXXXXXXXXXRH 161
           MGAP + L+ S D KGM+LE             W K    +                  H
Sbjct: 1   MGAPPQPLLMSLDLKGMVLETKDSCKPSGSL--WRKVLEPKVKRRLQRRRQRILMKRRAH 58

Query: 160 GWSTRRPRICMVRKVRTLKKLVPNGKSMGLDGLFRETAHYIMSLETQVKVMQI 2
              +RRP   + R+VRTLKKLVPNG SMGLDGLFRETA YI+SL+ +V+VMQI
Sbjct: 59  LPDSRRPTSGIQRRVRTLKKLVPNGDSMGLDGLFRETADYILSLQMRVEVMQI 111


>ref|XP_002320968.1| predicted protein [Populus trichocarpa] gi|222861741|gb|EEE99283.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/51 (72%), Positives = 45/51 (88%)
 Frame = -2

Query: 154 STRRPRICMVRKVRTLKKLVPNGKSMGLDGLFRETAHYIMSLETQVKVMQI 2
           STRR    + R+VRTLKKL+PNG+S+GLDGLFRETA YI+SL+T+VKVMQI
Sbjct: 75  STRRAGYGVGRRVRTLKKLIPNGESLGLDGLFRETADYILSLQTRVKVMQI 125


>ref|XP_002301522.1| predicted protein [Populus trichocarpa] gi|222843248|gb|EEE80795.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 47/115 (40%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
 Frame = -2

Query: 295 KGMILENNXXXXXXXXXXMWNKAFAAQSXXXXXXXXXXXXXXXRHGWSTRRPRICMVRK- 119
           KGM+  N           +WNK   AQ+                H  S R  RI M R+ 
Sbjct: 15  KGMVQGNEETMDHMPNEALWNKVSEAQTKRRCPLRRQKNGR---HARSKRPGRILMKRRA 71

Query: 118 ----------------VRTLKKLVPNGKSMGLDGLFRETAHYIMSLETQVKVMQI 2
                           VRTLKKL+PN +SMGLDGLFRETA YI+SL+ +VKVMQI
Sbjct: 72  RAEGSTVRSGYGIERRVRTLKKLIPNSESMGLDGLFRETADYILSLQMRVKVMQI 126


>ref|XP_003556194.1| PREDICTED: transcription factor UPBEAT1-like [Glycine max]
          Length = 127

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 16/121 (13%)
 Frame = -2

Query: 316 TLISFDAKGMILENNXXXXXXXXXXMWNKAFAAQSXXXXXXXXXXXXXXXRHGWSTRRPR 137
           +L+SF  K +I              +W+K   AQ+                   S RRPR
Sbjct: 8   SLVSFSLKDLIQGTEENKTSSSYGCLWSKVLTAQAKKVKGTKR-----------SVRRPR 56

Query: 136 ICMV----------------RKVRTLKKLVPNGKSMGLDGLFRETAHYIMSLETQVKVMQ 5
             ++                R+VRTLK LVPN  S+GLDGLFR+TA YI+SL+T+V+VMQ
Sbjct: 57  RILMMNRRSGSRRGSYNGIRRRVRTLKSLVPNSDSLGLDGLFRQTADYILSLQTRVRVMQ 116

Query: 4   I 2
           +
Sbjct: 117 V 117


>ref|XP_002515253.1| transcription factor, putative [Ricinus communis]
           gi|223545733|gb|EEF47237.1| transcription factor,
           putative [Ricinus communis]
          Length = 111

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/41 (65%), Positives = 37/41 (90%)
 Frame = -2

Query: 124 RKVRTLKKLVPNGKSMGLDGLFRETAHYIMSLETQVKVMQI 2
           ++V+TLKKL+PN +SMGL+GLFRETA YI+SL+ +V +MQI
Sbjct: 60  KRVKTLKKLIPNSESMGLEGLFRETADYILSLQMRVNLMQI 100


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