BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035487
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]   171   6e-41
ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40
ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arab...   142   3e-32
ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containi...   140   8e-32
emb|CBI21289.3| unnamed protein product [Vitis vinifera]              140   8e-32

>emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  171 bits (433), Expect = 6e-41
 Identities = 80/123 (65%), Positives = 97/123 (78%)
 Frame = -1

Query: 376 MPLQPDAPVYGALLGACRVHRNIELGVEVSNKLFELNPDDAGFYVLASNMYAAAGNWDGV 197
           MP QPD  VY  LLGACR+H NI+LG E+S K+FE+ P+DAG+YVL SNMYA AGNW+GV
Sbjct: 488 MPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGV 547

Query: 196 KMTRVSLKSKGLKKTPGLSSTEIDGKVHTFMAGDKDHPHYAEIRESLKNLITKIEAVGYV 17
           KMTR SL+SK LKK PG SS EI+ +++TFMAG+KDHP Y +I   LK LI KI+  GYV
Sbjct: 548 KMTRASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYV 607

Query: 16  PDT 8
           P+T
Sbjct: 608 PNT 610


>ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
           gi|297741370|emb|CBI32501.3| unnamed protein product
           [Vitis vinifera]
          Length = 697

 Score =  170 bits (431), Expect = 1e-40
 Identities = 79/123 (64%), Positives = 97/123 (78%)
 Frame = -1

Query: 376 MPLQPDAPVYGALLGACRVHRNIELGVEVSNKLFELNPDDAGFYVLASNMYAAAGNWDGV 197
           MP QPD  VY  LLGACR+H NI+LG E+S K+FE+ P+DAG+YVL SNMYA AGNW+GV
Sbjct: 488 MPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGV 547

Query: 196 KMTRVSLKSKGLKKTPGLSSTEIDGKVHTFMAGDKDHPHYAEIRESLKNLITKIEAVGYV 17
           KMTR SL+SK +KK PG SS EI+ +++TFMAG+KDHP Y +I   LK LI KI+  GYV
Sbjct: 548 KMTRASLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYV 607

Query: 16  PDT 8
           P+T
Sbjct: 608 PNT 610


>ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata] gi|297323489|gb|EFH53910.1| hypothetical protein
           ARALYDRAFT_485272 [Arabidopsis lyrata subsp. lyrata]
          Length = 1217

 Score =  142 bits (358), Expect = 3e-32
 Identities = 64/126 (50%), Positives = 93/126 (73%)
 Frame = -1

Query: 379 KMPLQPDAPVYGALLGACRVHRNIELGVEVSNKLFELNPDDAGFYVLASNMYAAAGNWDG 200
           +MP++P+  V+GALLGACRVH N ++G+  ++KLF+L P+ +G+YVL SN+YA AG W+ 
Sbjct: 472 EMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEE 531

Query: 199 VKMTRVSLKSKGLKKTPGLSSTEIDGKVHTFMAGDKDHPHYAEIRESLKNLITKIEAVGY 20
           V   R  +KSKGLKK PG S+ E++  +HTF+ GD+ HP  AEI   L  L+ K++ +GY
Sbjct: 532 VTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELGY 591

Query: 19  VPDTKS 2
           VPD++S
Sbjct: 592 VPDSES 597


>ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  140 bits (354), Expect = 8e-32
 Identities = 64/125 (51%), Positives = 90/125 (72%)
 Frame = -1

Query: 376 MPLQPDAPVYGALLGACRVHRNIELGVEVSNKLFELNPDDAGFYVLASNMYAAAGNWDGV 197
           M L+PD  V+GALLGACR+H+N++LG   + KLFEL+P + G+YVL SN+YA AG W+ V
Sbjct: 526 MKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDV 585

Query: 196 KMTRVSLKSKGLKKTPGLSSTEIDGKVHTFMAGDKDHPHYAEIRESLKNLITKIEAVGYV 17
           +  R+ +K+ GL K PG S  +I G+VH F+ GD++HP + +I E L+ L  K++ VGYV
Sbjct: 586 ERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYV 645

Query: 16  PDTKS 2
           PD  S
Sbjct: 646 PDMTS 650


>emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  140 bits (354), Expect = 8e-32
 Identities = 64/125 (51%), Positives = 90/125 (72%)
 Frame = -1

Query: 376 MPLQPDAPVYGALLGACRVHRNIELGVEVSNKLFELNPDDAGFYVLASNMYAAAGNWDGV 197
           M L+PD  V+GALLGACR+H+N++LG   + KLFEL+P + G+YVL SN+YA AG W+ V
Sbjct: 372 MKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDV 431

Query: 196 KMTRVSLKSKGLKKTPGLSSTEIDGKVHTFMAGDKDHPHYAEIRESLKNLITKIEAVGYV 17
           +  R+ +K+ GL K PG S  +I G+VH F+ GD++HP + +I E L+ L  K++ VGYV
Sbjct: 432 ERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYV 491

Query: 16  PDTKS 2
           PD  S
Sbjct: 492 PDMTS 496