BLASTX nr result

ID: Coptis23_contig00035484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035484
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317914.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_003530012.1| PREDICTED: uncharacterized protein LOC100786...    83   2e-14
ref|XP_002276247.1| PREDICTED: uncharacterized protein LOC100249...    81   1e-13
emb|CAN64289.1| hypothetical protein VITISV_022327 [Vitis vinifera]    81   1e-13
ref|XP_002322057.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13

>ref|XP_002317914.1| predicted protein [Populus trichocarpa] gi|222858587|gb|EEE96134.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 55/136 (40%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
 Frame = +2

Query: 5   DGIRTFMKFLKAEKEKNYQIFKTFIRRNKRTCIVDPTLHHLLXXXXXXXXXXXXXXXXXX 184
           DGIRTFM FLKA+KEK  QI   F +RN+R   VDP L  L+                  
Sbjct: 236 DGIRTFMNFLKADKEKTCQILMAFFKRNRRDS-VDPVLLQLMKKVNKKKRIKLK------ 288

Query: 185 XXXXXXXXXXXXXXXXXXXXXXDISRVRKCLR-RTLPRDEEMEMLMGXXXXXXXXXXXXM 361
                                 D+ RVR C+R R L  +EEME+LMG            M
Sbjct: 289 ----------------------DLRRVRTCIRKRKLTVEEEMEILMGLIDLKLVSRVLRM 326

Query: 362 SEISEEQLHWCEEKMS 409
           S++SEEQLHWCEEKMS
Sbjct: 327 SDMSEEQLHWCEEKMS 342


>ref|XP_003530012.1| PREDICTED: uncharacterized protein LOC100786564 [Glycine max]
          Length = 592

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 56/136 (41%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
 Frame = +2

Query: 5   DGIRTFMKFLKAEKEKNYQIFKTFIRRNKRTCIVDPTLHHLLXXXXXXXXXXXXXXXXXX 184
           DGIRTFM FLKA+KEK  QI     RRN++  +VDPTL  L+                  
Sbjct: 465 DGIRTFMSFLKADKEKPCQILAACFRRNRKP-LVDPTLLRLIKKVNQKKKMKVK------ 517

Query: 185 XXXXXXXXXXXXXXXXXXXXXXDISRVRKCLR-RTLPRDEEMEMLMGXXXXXXXXXXXXM 361
                                 D+ R RKCLR R L  +EEME+LM             M
Sbjct: 518 ----------------------DLRRSRKCLRKRKLKGEEEMEILMALIDLKVVSRVLRM 555

Query: 362 SEISEEQLHWCEEKMS 409
           SE+SEEQLHWCEEKMS
Sbjct: 556 SELSEEQLHWCEEKMS 571


>ref|XP_002276247.1| PREDICTED: uncharacterized protein LOC100249284 [Vitis vinifera]
           gi|297734207|emb|CBI15454.3| unnamed protein product
           [Vitis vinifera]
          Length = 601

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 52/136 (38%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
 Frame = +2

Query: 5   DGIRTFMKFLKAEKEKNYQIFKTFIRRNKRTCIVDPTLHHLLXXXXXXXXXXXXXXXXXX 184
           +GIRTFM FLK ++EK  QI     +RN++  +VDPTL HL+                  
Sbjct: 474 EGIRTFMNFLKGDREKPCQIIAALFKRNRKG-LVDPTLLHLMKKANQKKKLRLK------ 526

Query: 185 XXXXXXXXXXXXXXXXXXXXXXDISRVRKCLR-RTLPRDEEMEMLMGXXXXXXXXXXXXM 361
                                 D+ R  KCLR R L  +EEME+LMG            M
Sbjct: 527 ----------------------DLRRTGKCLRKRRLKEEEEMEILMGLIDIKVVSRVLRM 564

Query: 362 SEISEEQLHWCEEKMS 409
           S+I+EEQLHWCEEKMS
Sbjct: 565 SDITEEQLHWCEEKMS 580


>emb|CAN64289.1| hypothetical protein VITISV_022327 [Vitis vinifera]
          Length = 585

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 52/136 (38%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
 Frame = +2

Query: 5   DGIRTFMKFLKAEKEKNYQIFKTFIRRNKRTCIVDPTLHHLLXXXXXXXXXXXXXXXXXX 184
           +GIRTFM FLK ++EK  QI     +RN++  +VDPTL HL+                  
Sbjct: 458 EGIRTFMNFLKGDREKPCQIIAALFKRNRKG-LVDPTLLHLMKKANQKKKLRLK------ 510

Query: 185 XXXXXXXXXXXXXXXXXXXXXXDISRVRKCLR-RTLPRDEEMEMLMGXXXXXXXXXXXXM 361
                                 D+ R  KCLR R L  +EEME+LMG            M
Sbjct: 511 ----------------------DLRRTGKCLRKRRLKEEEEMEILMGLIDIKVVSRVLRM 548

Query: 362 SEISEEQLHWCEEKMS 409
           S+I+EEQLHWCEEKMS
Sbjct: 549 SDITEEQLHWCEEKMS 564


>ref|XP_002322057.1| predicted protein [Populus trichocarpa] gi|222869053|gb|EEF06184.1|
           predicted protein [Populus trichocarpa]
          Length = 421

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 53/136 (38%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
 Frame = +2

Query: 5   DGIRTFMKFLKAEKEKNYQIFKTFIRRNKRTCIVDPTLHHLLXXXXXXXXXXXXXXXXXX 184
           DGIRTFM FLK +KEK  QI K F RRN+R   VDP L  L+                  
Sbjct: 277 DGIRTFMDFLKDDKEKTCQILKAFFRRNRRGS-VDPVLLQLMKKVNKKVSLNKHKNNPTF 335

Query: 185 XXXXXXXXXXXXXXXXXXXXXXDISRVRKCLR-RTLPRDEEMEMLMGXXXXXXXXXXXXM 361
                                 D+ R R C+R R L  +EEME LMG            M
Sbjct: 336 HSHVMKKMKLK-----------DLRRARTCIRKRKLTVEEEMEFLMGLIDLKLVSRVLRM 384

Query: 362 SEISEEQLHWCEEKMS 409
           +++SEE+LHWCEEKMS
Sbjct: 385 ADMSEEKLHWCEEKMS 400


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