BLASTX nr result

ID: Coptis23_contig00035478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035478
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/112 (29%), Positives = 54/112 (48%)
 Frame = +1

Query: 34  KAPPFRFYNFWVYQQEYKDMFEEVWNMAIYNNPMYVLIHXXXXXXXXXXPWARANFSHLH 213
           K  PFRF++ W+   E+  + ++VW+      PMY L             +  A+FS++ 
Sbjct: 618 KKKPFRFFDMWMDHDEFMPLVKKVWDQNSRGCPMYQLCCKLRKLKQELKLFNMAHFSNIS 677

Query: 214 ERVETAKHELQDVQILL*SDSGNKFLAERERVCLSRYNDLARAETVDIQQKS 369
           +RV  AK+++   Q  L +   N  L  RER  + +Y    RAE    +QK+
Sbjct: 678 DRVRDAKNKMDKAQQALHTAHENPILCMRERDVVHKYASTVRAEESFFKQKA 729


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