BLASTX nr result

ID: Coptis23_contig00035472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035472
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529737.1| protein binding protein, putative [Ricinus c...   139   2e-31
ref|XP_002327844.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
ref|XP_003597022.1| hypothetical protein MTR_2g088760 [Medicago ...   136   2e-30
ref|XP_003541941.1| PREDICTED: polyubiquitin-like [Glycine max]       132   3e-29
ref|XP_003539508.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquiti...   132   3e-29

>ref|XP_002529737.1| protein binding protein, putative [Ricinus communis]
           gi|223530778|gb|EEF32644.1| protein binding protein,
           putative [Ricinus communis]
          Length = 255

 Score =  139 bits (350), Expect = 2e-31
 Identities = 67/113 (59%), Positives = 88/113 (77%)
 Frame = -2

Query: 385 DHLHLCDYGICDQSEINMVYKNTSSMKAEPTSRIVSFMVQTSASLFNSAIIPLEMKDSTT 206
           D  +L +YGI + SEI +  K  S ++ EP +R +S  VQTS+SL N+A IPLEMKDS+T
Sbjct: 139 DFRNLSEYGIREFSEIIVFLKTMSRLRDEPCTRKLSITVQTSSSLLNAAAIPLEMKDSST 198

Query: 205 VTELRKRLLDEKILPRDEYFFIHKQRIMQESCSLRWHGVENKDFLYVFKGTIS 47
           +++LR+ LL  K+LP D+Y FIHKQRIM+++CSLRWHGVEN D LYVFKGT+S
Sbjct: 199 ISDLRRLLLSRKVLPLDDYLFIHKQRIMRDNCSLRWHGVENGDSLYVFKGTVS 251


>ref|XP_002327844.1| predicted protein [Populus trichocarpa] gi|222837253|gb|EEE75632.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/114 (58%), Positives = 89/114 (78%)
 Frame = -2

Query: 385 DHLHLCDYGICDQSEINMVYKNTSSMKAEPTSRIVSFMVQTSASLFNSAIIPLEMKDSTT 206
           D  +L +YGI + SEI +  K  + ++ +P SR +S +VQTS+ L N+A IPLEMKDS+T
Sbjct: 136 DFRNLSEYGIHEFSEIVVFLKTMTRIRDDPPSRKLSIVVQTSSCLLNAACIPLEMKDSST 195

Query: 205 VTELRKRLLDEKILPRDEYFFIHKQRIMQESCSLRWHGVENKDFLYVFKGTISR 44
           V ++R+ LL  KILP+D+Y FIHKQRIM++SCSLRWHGV+N D LYVFKGT+SR
Sbjct: 196 VNDMRQLLLSRKILPQDDYLFIHKQRIMRDSCSLRWHGVDNGDSLYVFKGTVSR 249


>ref|XP_003597022.1| hypothetical protein MTR_2g088760 [Medicago truncatula]
           gi|355486070|gb|AES67273.1| hypothetical protein
           MTR_2g088760 [Medicago truncatula]
          Length = 252

 Score =  136 bits (343), Expect = 2e-30
 Identities = 69/114 (60%), Positives = 90/114 (78%)
 Frame = -2

Query: 385 DHLHLCDYGICDQSEINMVYKNTSSMKAEPTSRIVSFMVQTSASLFNSAIIPLEMKDSTT 206
           D  +L +YGI + SEI +  K T+  K EP +R +SF++QTS+SL N+A IPLEMKD++T
Sbjct: 136 DFRNLNEYGIREFSEIIVFLKTTNRTK-EPPTRKLSFVLQTSSSLLNAATIPLEMKDTST 194

Query: 205 VTELRKRLLDEKILPRDEYFFIHKQRIMQESCSLRWHGVENKDFLYVFKGTISR 44
           V +L++ LL  KILP D+Y FIH+QRIM++SCSLRWHGVEN D LYVFKGT+SR
Sbjct: 195 VNDLKQLLLSRKILPVDDYLFIHRQRIMRDSCSLRWHGVENGDQLYVFKGTVSR 248


>ref|XP_003541941.1| PREDICTED: polyubiquitin-like [Glycine max]
          Length = 249

 Score =  132 bits (332), Expect = 3e-29
 Identities = 64/110 (58%), Positives = 86/110 (78%)
 Frame = -2

Query: 373 LCDYGICDQSEINMVYKNTSSMKAEPTSRIVSFMVQTSASLFNSAIIPLEMKDSTTVTEL 194
           L +YGI + SEI +  K  +  + EP +R +S +VQTS+SL N A IPLEM+D++TV++L
Sbjct: 136 LSEYGIREFSEIVVFLKPLNRSREEPPTRKLSLVVQTSSSLLNGATIPLEMRDASTVSDL 195

Query: 193 RKRLLDEKILPRDEYFFIHKQRIMQESCSLRWHGVENKDFLYVFKGTISR 44
           ++ L+  KILP D+Y FIHKQRIM++SCSLRWHGVE+ D LYVFKGT+SR
Sbjct: 196 KQLLISRKILPVDDYLFIHKQRIMRDSCSLRWHGVEDGDCLYVFKGTVSR 245


>ref|XP_003539508.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-like [Glycine max]
          Length = 268

 Score =  132 bits (332), Expect = 3e-29
 Identities = 64/110 (58%), Positives = 85/110 (77%)
 Frame = -2

Query: 373 LCDYGICDQSEINMVYKNTSSMKAEPTSRIVSFMVQTSASLFNSAIIPLEMKDSTTVTEL 194
           L +YGI   SEI +  K  +  + EP +R +S +VQTS+SL N+A IPLEM+D++TV +L
Sbjct: 155 LSEYGIRGFSEIAVFXKPLNRSREEPPTRKLSLVVQTSSSLLNAATIPLEMRDASTVGDL 214

Query: 193 RKRLLDEKILPRDEYFFIHKQRIMQESCSLRWHGVENKDFLYVFKGTISR 44
           ++ L+  KILP D+Y FIHKQRIM++SCSLRWHG+EN D LYVFKGT+SR
Sbjct: 215 KQLLISRKILPVDDYLFIHKQRIMRDSCSLRWHGIENGDCLYVFKGTVSR 264


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