BLASTX nr result

ID: Coptis23_contig00035463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035463
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24552.3| unnamed protein product [Vitis vinifera]              184   6e-45
ref|XP_002265587.1| PREDICTED: mitochondrial intermediate peptid...   184   6e-45
ref|XP_002321840.1| predicted protein [Populus trichocarpa] gi|2...   175   4e-42
ref|XP_002510927.1| mitochondrial intermediate peptidase, putati...   170   1e-40
ref|XP_004148134.1| PREDICTED: mitochondrial intermediate peptid...   169   2e-40

>emb|CBI24552.3| unnamed protein product [Vitis vinifera]
          Length = 551

 Score =  184 bits (467), Expect = 6e-45
 Identities = 85/119 (71%), Positives = 101/119 (84%)
 Frame = +3

Query: 9   LASSPEVVMSFLLELSNIVRPKADQEFNSVRSYKRQNYKQTYEDLEPWDETYLTGMMKSS 188
           +ASSPEVVMSFL E+S ++RPKAD+EF ++R +K+    Q  EDLEPWDE Y TGMMKSS
Sbjct: 380 MASSPEVVMSFLFEMSKMIRPKADEEFKAIRDFKKARTGQICEDLEPWDEAYFTGMMKSS 439

Query: 189 AYNLESSVISSYFPLPQCLEGLNVLVQSLFGVTFCTIPLAPDESWHQDVLKMALHHPEE 365
           AYNL+SSV++SYFPL QC+EGL VLV+SLFG TF +IPLAP ESWH DVLKM+LHHPEE
Sbjct: 440 AYNLDSSVVASYFPLHQCIEGLKVLVESLFGATFRSIPLAPGESWHPDVLKMSLHHPEE 498


>ref|XP_002265587.1| PREDICTED: mitochondrial intermediate peptidase [Vitis vinifera]
          Length = 771

 Score =  184 bits (467), Expect = 6e-45
 Identities = 85/119 (71%), Positives = 101/119 (84%)
 Frame = +3

Query: 9   LASSPEVVMSFLLELSNIVRPKADQEFNSVRSYKRQNYKQTYEDLEPWDETYLTGMMKSS 188
           +ASSPEVVMSFL E+S ++RPKAD+EF ++R +K+    Q  EDLEPWDE Y TGMMKSS
Sbjct: 360 MASSPEVVMSFLFEMSKMIRPKADEEFKAIRDFKKARTGQICEDLEPWDEAYFTGMMKSS 419

Query: 189 AYNLESSVISSYFPLPQCLEGLNVLVQSLFGVTFCTIPLAPDESWHQDVLKMALHHPEE 365
           AYNL+SSV++SYFPL QC+EGL VLV+SLFG TF +IPLAP ESWH DVLKM+LHHPEE
Sbjct: 420 AYNLDSSVVASYFPLHQCIEGLKVLVESLFGATFRSIPLAPGESWHPDVLKMSLHHPEE 478


>ref|XP_002321840.1| predicted protein [Populus trichocarpa] gi|222868836|gb|EEF05967.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  175 bits (443), Expect = 4e-42
 Identities = 81/119 (68%), Positives = 99/119 (83%)
 Frame = +3

Query: 9   LASSPEVVMSFLLELSNIVRPKADQEFNSVRSYKRQNYKQTYEDLEPWDETYLTGMMKSS 188
           LASSPEVV+SFL E+S +VRP+AD+EF ++R++KR+   Q   DLEPWDETY T MMKSS
Sbjct: 320 LASSPEVVISFLHEMSKMVRPRADEEFEAIRNFKREKCGQRCIDLEPWDETYYTAMMKSS 379

Query: 189 AYNLESSVISSYFPLPQCLEGLNVLVQSLFGVTFCTIPLAPDESWHQDVLKMALHHPEE 365
           A+NL+SS+++SYFPLPQC+EGL VLV SLFG     IP+AP ESWH DVLKM+LHHPEE
Sbjct: 380 AHNLDSSIVASYFPLPQCIEGLKVLVNSLFGAMLRNIPMAPGESWHPDVLKMSLHHPEE 438


>ref|XP_002510927.1| mitochondrial intermediate peptidase, putative [Ricinus communis]
           gi|223550042|gb|EEF51529.1| mitochondrial intermediate
           peptidase, putative [Ricinus communis]
          Length = 718

 Score =  170 bits (431), Expect = 1e-40
 Identities = 79/119 (66%), Positives = 97/119 (81%)
 Frame = +3

Query: 9   LASSPEVVMSFLLELSNIVRPKADQEFNSVRSYKRQNYKQTYEDLEPWDETYLTGMMKSS 188
           LASSP+VV SFL E+S +VRPKAD+EF ++R++K+Q   +   DLEPWDE + TGMMKSS
Sbjct: 302 LASSPKVVTSFLNEMSQLVRPKADKEFEAIRNFKKQKCGKKCIDLEPWDEAHYTGMMKSS 361

Query: 189 AYNLESSVISSYFPLPQCLEGLNVLVQSLFGVTFCTIPLAPDESWHQDVLKMALHHPEE 365
           A NL+SS+++SYFPL QC+EGL VLV SLFG TF  +P+AP ESWH DVLKMA HHPEE
Sbjct: 362 AQNLDSSIVASYFPLAQCIEGLKVLVNSLFGATFHNVPMAPGESWHPDVLKMAFHHPEE 420


>ref|XP_004148134.1| PREDICTED: mitochondrial intermediate peptidase-like [Cucumis
           sativus] gi|449499651|ref|XP_004160875.1| PREDICTED:
           mitochondrial intermediate peptidase-like [Cucumis
           sativus]
          Length = 718

 Score =  169 bits (429), Expect = 2e-40
 Identities = 80/119 (67%), Positives = 95/119 (79%)
 Frame = +3

Query: 9   LASSPEVVMSFLLELSNIVRPKADQEFNSVRSYKRQNYKQTYEDLEPWDETYLTGMMKSS 188
           LASSP VVMSFL ELS +VR +AD+EFN +R +K +     +EDLEPWDE Y T MMKS+
Sbjct: 313 LASSPAVVMSFLQELSKVVRSRADEEFNQIREFKLKKCINKFEDLEPWDEAYYTSMMKST 372

Query: 189 AYNLESSVISSYFPLPQCLEGLNVLVQSLFGVTFCTIPLAPDESWHQDVLKMALHHPEE 365
           AYNL+SSVI+SYFPL QC+EGL  LV+SLFG +F  IPLAP ESWH DVLK++L HPEE
Sbjct: 373 AYNLDSSVIASYFPLSQCIEGLKTLVKSLFGASFYNIPLAPGESWHPDVLKLSLQHPEE 431


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