BLASTX nr result

ID: Coptis23_contig00035462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035462
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35828.3| unnamed protein product [Vitis vinifera]              223   1e-56
ref|XP_002272087.1| PREDICTED: uncharacterized protein LOC100241...   223   1e-56
ref|XP_002529183.1| conserved hypothetical protein [Ricinus comm...   209   2e-52
tpg|DAA43709.1| TPA: hypothetical protein ZEAMMB73_099943 [Zea m...   209   2e-52
ref|XP_002468395.1| hypothetical protein SORBIDRAFT_01g045130 [S...   207   7e-52

>emb|CBI35828.3| unnamed protein product [Vitis vinifera]
          Length = 546

 Score =  223 bits (569), Expect = 1e-56
 Identities = 123/178 (69%), Positives = 139/178 (78%), Gaps = 1/178 (0%)
 Frame = -1

Query: 543 MAFLTPGVLLKLLQSINSVARVHGEYRSVLLQVISIVPALTGSELFPDHGFFIKVXXXXX 364
           MA LTPGVLLKLLQSINS  +V GEYRSVLLQVISIVPAL+GSEL+P+HGFFIKV     
Sbjct: 1   MASLTPGVLLKLLQSINSNIKVRGEYRSVLLQVISIVPALSGSELWPNHGFFIKVSDSSH 60

Query: 363 XXXXXXSKEDNELILADKLQLGQFIYVDRIKPGTPVPTLVGVRPVPGRNQFVGNPKNLMN 184
                 SKEDNELIL +KLQLGQF YVDR++ GTPVP LVGVRPVPGRN FVGNPK+LM 
Sbjct: 61  STYVSLSKEDNELILNNKLQLGQFFYVDRVEAGTPVPILVGVRPVPGRNPFVGNPKDLMQ 120

Query: 183 ILEPSDSLNSGDSEATN-SISYELLEAKEESPKKKFVIKEQKVVVASRYMLGFSSTSS 13
           +L PS+     D E  N S   ELLE KEESP++K VIKE+KVVVASRYM G  +++S
Sbjct: 121 MLVPSEGPVQVDHEGINGSKLSELLEPKEESPRQKIVIKEEKVVVASRYMQGVLTSNS 178


>ref|XP_002272087.1| PREDICTED: uncharacterized protein LOC100241213 [Vitis vinifera]
          Length = 529

 Score =  223 bits (569), Expect = 1e-56
 Identities = 123/178 (69%), Positives = 139/178 (78%), Gaps = 1/178 (0%)
 Frame = -1

Query: 543 MAFLTPGVLLKLLQSINSVARVHGEYRSVLLQVISIVPALTGSELFPDHGFFIKVXXXXX 364
           MA LTPGVLLKLLQSINS  +V GEYRSVLLQVISIVPAL+GSEL+P+HGFFIKV     
Sbjct: 1   MASLTPGVLLKLLQSINSNIKVRGEYRSVLLQVISIVPALSGSELWPNHGFFIKVSDSSH 60

Query: 363 XXXXXXSKEDNELILADKLQLGQFIYVDRIKPGTPVPTLVGVRPVPGRNQFVGNPKNLMN 184
                 SKEDNELIL +KLQLGQF YVDR++ GTPVP LVGVRPVPGRN FVGNPK+LM 
Sbjct: 61  STYVSLSKEDNELILNNKLQLGQFFYVDRVEAGTPVPILVGVRPVPGRNPFVGNPKDLMQ 120

Query: 183 ILEPSDSLNSGDSEATN-SISYELLEAKEESPKKKFVIKEQKVVVASRYMLGFSSTSS 13
           +L PS+     D E  N S   ELLE KEESP++K VIKE+KVVVASRYM G  +++S
Sbjct: 121 MLVPSEGPVQVDHEGINGSKLSELLEPKEESPRQKIVIKEEKVVVASRYMQGVLTSNS 178


>ref|XP_002529183.1| conserved hypothetical protein [Ricinus communis]
           gi|223531361|gb|EEF33197.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 540

 Score =  209 bits (533), Expect = 2e-52
 Identities = 114/177 (64%), Positives = 135/177 (76%), Gaps = 1/177 (0%)
 Frame = -1

Query: 543 MAFLTPGVLLKLLQSINSVARVHGEYRSVLLQVISIVPALTGSELFPDHGFFIKVXXXXX 364
           MA LTPGVLLKLLQS+NS  +V GEYRSVLLQVISIVPALTGSEL+P+ GFF+KV     
Sbjct: 1   MASLTPGVLLKLLQSMNSNIKVRGEYRSVLLQVISIVPALTGSELWPNQGFFVKVSDSSH 60

Query: 363 XXXXXXSKEDNELILADKLQLGQFIYVDRIKPGTPVPTLVGVRPVPGRNQFVGNPKNLMN 184
                 S+EDNELIL +KLQLGQF YVDRI+ GTPVP LVGVRP+PGRN FVGNPK+LM 
Sbjct: 61  STYVSLSREDNELILNNKLQLGQFFYVDRIEAGTPVPILVGVRPLPGRNPFVGNPKDLMQ 120

Query: 183 ILEPSDSLNSGDSEATN-SISYELLEAKEESPKKKFVIKEQKVVVASRYMLGFSSTS 16
           ++ PS+     D +  N S   EL+E KEE+ ++K VIKE+K VVASRYM G  ++S
Sbjct: 121 MVVPSEGPVPFDDKGVNGSKLRELIEGKEENSRQKIVIKEEKAVVASRYMQGVLTSS 177


>tpg|DAA43709.1| TPA: hypothetical protein ZEAMMB73_099943 [Zea mays]
          Length = 572

 Score =  209 bits (532), Expect = 2e-52
 Identities = 109/176 (61%), Positives = 136/176 (77%)
 Frame = -1

Query: 543 MAFLTPGVLLKLLQSINSVARVHGEYRSVLLQVISIVPALTGSELFPDHGFFIKVXXXXX 364
           MA LTPG+LLK+L+ INS  +V GEYRS+LLQVISIVPA+TGSEL+PDHGFFIKV     
Sbjct: 1   MASLTPGILLKVLKHINSDVKVCGEYRSILLQVISIVPAITGSELWPDHGFFIKVSDSSH 60

Query: 363 XXXXXXSKEDNELILADKLQLGQFIYVDRIKPGTPVPTLVGVRPVPGRNQFVGNPKNLMN 184
                 SKEDNELIL++KLQLGQFIYV++++   PVP LVGVRPVPGRN  +GNPK+LM 
Sbjct: 61  STYVSLSKEDNELILSNKLQLGQFIYVEKVQSSIPVPVLVGVRPVPGRNPCIGNPKDLMQ 120

Query: 183 ILEPSDSLNSGDSEATNSISYELLEAKEESPKKKFVIKEQKVVVASRYMLGFSSTS 16
           +  PS  + + D + T S S +L E+++E+ ++K VIKEQK VVASRYMLG SS +
Sbjct: 121 MSTPSGVMEALDHQRTTSKSADLSESEKENLQRKVVIKEQKTVVASRYMLGVSSNN 176


>ref|XP_002468395.1| hypothetical protein SORBIDRAFT_01g045130 [Sorghum bicolor]
           gi|241922249|gb|EER95393.1| hypothetical protein
           SORBIDRAFT_01g045130 [Sorghum bicolor]
          Length = 566

 Score =  207 bits (528), Expect = 7e-52
 Identities = 108/176 (61%), Positives = 136/176 (77%)
 Frame = -1

Query: 543 MAFLTPGVLLKLLQSINSVARVHGEYRSVLLQVISIVPALTGSELFPDHGFFIKVXXXXX 364
           MA LTPG+LLK+L++INS  +V GEYRS+LLQVISIVPA+TGSEL+PDHGFFIKV     
Sbjct: 1   MASLTPGILLKVLKNINSDVKVCGEYRSILLQVISIVPAITGSELWPDHGFFIKVSDSSH 60

Query: 363 XXXXXXSKEDNELILADKLQLGQFIYVDRIKPGTPVPTLVGVRPVPGRNQFVGNPKNLMN 184
                 SKEDNELIL++KLQLGQFIYV++++   PVP LVGVRPVPGRN  +GNPK+LM 
Sbjct: 61  STYVSLSKEDNELILSNKLQLGQFIYVEKVQSSIPVPVLVGVRPVPGRNPCIGNPKDLMQ 120

Query: 183 ILEPSDSLNSGDSEATNSISYELLEAKEESPKKKFVIKEQKVVVASRYMLGFSSTS 16
           +  PS  + + D +   S S +L E+++E+ ++K VIKEQK VVASRYMLG SS +
Sbjct: 121 MSTPSGVMEALDHQRKTSKSADLSESEKENLQRKVVIKEQKTVVASRYMLGVSSNN 176


Top