BLASTX nr result

ID: Coptis23_contig00035446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035446
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541516.1| PREDICTED: probable glucan endo-1,3-beta-glu...   117   1e-24
ref|XP_004144397.1| PREDICTED: probable glucan endo-1,3-beta-glu...   114   1e-23
ref|XP_003632055.1| PREDICTED: LOW QUALITY PROTEIN: probable glu...   113   2e-23
emb|CAN60692.1| hypothetical protein VITISV_007558 [Vitis vinifera]   112   3e-23
ref|XP_003632052.1| PREDICTED: probable glucan endo-1,3-beta-glu...   111   5e-23

>ref|XP_003541516.1| PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like
           [Glycine max]
          Length = 391

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/106 (53%), Positives = 79/106 (74%)
 Frame = -2

Query: 326 MSLFPLFLCLGFLSFTAAASNKLGVNYGQLGNNLPSFSQSIQLMDSLKATRVKIYSADRQ 147
           MS   +FL    L   + AS+ +GVNYGQLGNNLPS  +SI+L+ ++KA RVKIY A+ +
Sbjct: 1   MSTVAIFLIFLLLLSRSKASSNIGVNYGQLGNNLPSPHRSIELLTTMKAGRVKIYDANPE 60

Query: 146 LLRVLGNTDLQVAIMVSNQEISHIASSQNASDEWVRTKILPFYPKT 9
           +LR+L NT L+V+IM+ N EIS IA++Q+ +DEWVR  +LP+YP T
Sbjct: 61  ILRLLSNTKLKVSIMIPNNEISGIAANQSIADEWVRNNVLPYYPNT 106


>ref|XP_004144397.1| PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like
           [Cucumis sativus] gi|449520485|ref|XP_004167264.1|
           PREDICTED: probable glucan endo-1,3-beta-glucosidase
           A6-like [Cucumis sativus]
          Length = 466

 Score =  114 bits (284), Expect = 1e-23
 Identities = 59/103 (57%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
 Frame = -2

Query: 311 LFLCLGFLSFTAAA-SNKLGVNYGQLGNNLPSFSQSIQLMDSLKATRVKIYSADRQLLRV 135
           L   L FLS ++A  S  +G+NYGQLGNNLP  S S+ L+ SL A  VKIY A+ Q+L+ 
Sbjct: 8   LLFFLFFLSLSSAEISTLVGINYGQLGNNLPPPSHSVNLIKSLNAQIVKIYDANPQILKA 67

Query: 134 LGNTDLQVAIMVSNQEISHIASSQNASDEWVRTKILPFYPKTK 6
           L NTDL+V++MV N+ I +I+SSQN +D+WVRT ILPFYP+TK
Sbjct: 68  LKNTDLRVSVMVPNELIINISSSQNLADQWVRTNILPFYPQTK 110


>ref|XP_003632055.1| PREDICTED: LOW QUALITY PROTEIN: probable glucan
           endo-1,3-beta-glucosidase A6-like [Vitis vinifera]
          Length = 474

 Score =  113 bits (282), Expect = 2e-23
 Identities = 59/116 (50%), Positives = 83/116 (71%), Gaps = 1/116 (0%)
 Frame = -2

Query: 353 HKLQQKLPNMSLFPLFLCLGFLSFT-AAASNKLGVNYGQLGNNLPSFSQSIQLMDSLKAT 177
           H    ++  M L  L     FL+FT A   +K+GVNYGQLG+NLPS SQSI+L+ S+KA 
Sbjct: 4   HSSGDEVTEMCLLALSF-FSFLAFTHAEIPSKIGVNYGQLGDNLPSPSQSIELIKSMKAG 62

Query: 176 RVKIYSADRQLLRVLGNTDLQVAIMVSNQEISHIASSQNASDEWVRTKILPFYPKT 9
           RVK+Y A+ ++L +L  T +QV+IMV NQEIS+I+S+Q  +D+WVR  +L +YP+T
Sbjct: 63  RVKLYDANPEILNLLSGTKIQVSIMVPNQEISNISSNQTLADQWVRDNVLSYYPQT 118


>emb|CAN60692.1| hypothetical protein VITISV_007558 [Vitis vinifera]
          Length = 404

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/96 (57%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
 Frame = -2

Query: 293 FLSFT-AAASNKLGVNYGQLGNNLPSFSQSIQLMDSLKATRVKIYSADRQLLRVLGNTDL 117
           FL+FT A   +K+GVNYGQLG+NLPS SQSI+L+ S+KA RVK+Y A+ ++L +L  T +
Sbjct: 11  FLAFTHAEIPSKIGVNYGQLGDNLPSPSQSIELIKSMKAGRVKLYDANPEILNLLSGTKI 70

Query: 116 QVAIMVSNQEISHIASSQNASDEWVRTKILPFYPKT 9
           QV+IMV NQEIS+I+S+Q  +D+WVR  +L +YP+T
Sbjct: 71  QVSIMVPNQEISNISSNQTLADQWVRDNVLSYYPQT 106


>ref|XP_003632052.1| PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like [Vitis
           vinifera] gi|296089651|emb|CBI39470.3| unnamed protein
           product [Vitis vinifera]
          Length = 467

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/101 (54%), Positives = 77/101 (76%)
 Frame = -2

Query: 311 LFLCLGFLSFTAAASNKLGVNYGQLGNNLPSFSQSIQLMDSLKATRVKIYSADRQLLRVL 132
           +F  L FLS +A  S K+GVNYG LGNNLP+ S+S+QL+  LKA RVK+Y  + ++L  L
Sbjct: 13  IFSILFFLS-SAEISPKVGVNYGLLGNNLPAASRSVQLIKGLKAGRVKLYDPNPEILEAL 71

Query: 131 GNTDLQVAIMVSNQEISHIASSQNASDEWVRTKILPFYPKT 9
             T+LQV+IMV NQ+IS+I+ SQ  SD+WV+T ++P+YP+T
Sbjct: 72  SGTELQVSIMVPNQQISNISRSQKLSDQWVKTNVVPYYPET 112


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