BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035439
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|2...   154   2e-35
emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]   150   2e-34
ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containi...   146   4e-33
ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]         133   3e-29

>ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|222870863|gb|EEF07994.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  154 bits (388), Expect = 2e-35
 Identities = 69/108 (63%), Positives = 86/108 (79%)
 Frame = -1

Query: 645 VTLNLHVKINNLVIQGLCSENDLNRAFQVYLSTRTRGISVSAKSFSSLVACFCKKGDVHK 466
           VT +LHVK+NN+V+QGLC+  +LNR+FQ+Y+  RTRGIS+ A +F SLV CFCKKGD+HK
Sbjct: 367 VTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHK 426

Query: 465 AARIVSEMVLDGCVPDEDTWNAAVGGFWCRKKARDAADLLQTELMGEF 322
           AARI  EMVLDGCVPD   W+A VGGFW R+K R+A + +  ELM EF
Sbjct: 427 AARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAFESIVVELMNEF 474


>emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score =  150 bits (379), Expect = 2e-34
 Identities = 70/108 (64%), Positives = 89/108 (82%)
 Frame = -1

Query: 645 VTLNLHVKINNLVIQGLCSENDLNRAFQVYLSTRTRGISVSAKSFSSLVACFCKKGDVHK 466
           +T +LHV+I+N+V+QGLC+E+  NRAFQ+YLS RTRGIS+ AK+F SLV  FC KGD+HK
Sbjct: 367 LTWSLHVRIHNIVVQGLCTEHP-NRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHK 425

Query: 465 AARIVSEMVLDGCVPDEDTWNAAVGGFWCRKKARDAADLLQTELMGEF 322
           AA +V EMVLDGC+PDE TWNA V  FW R+K R++A+L+Q ELMG F
Sbjct: 426 AAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRKVRESAELVQVELMGTF 473


>ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera] gi|296087974|emb|CBI35257.3| unnamed
           protein product [Vitis vinifera]
          Length = 503

 Score =  146 bits (368), Expect = 4e-33
 Identities = 69/107 (64%), Positives = 88/107 (82%)
 Frame = -1

Query: 645 VTLNLHVKINNLVIQGLCSENDLNRAFQVYLSTRTRGISVSAKSFSSLVACFCKKGDVHK 466
           +T +LHV+I+N+V+QGLC+E+  NRAFQ+YLS RTRGIS+ AK+F SLV  FC KGD+HK
Sbjct: 367 LTWSLHVRIHNIVVQGLCTEHP-NRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHK 425

Query: 465 AARIVSEMVLDGCVPDEDTWNAAVGGFWCRKKARDAADLLQTELMGE 325
           AA +V EMVLDGC+PDE TWNA V  FW R+K R++A+L+Q ELM E
Sbjct: 426 AAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELVQVELMVE 472


>ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Glycine max]
          Length = 479

 Score =  137 bits (346), Expect = 1e-30
 Identities = 62/109 (56%), Positives = 81/109 (74%)
 Frame = -1

Query: 636 NLHVKINNLVIQGLCSENDLNRAFQVYLSTRTRGISVSAKSFSSLVACFCKKGDVHKAAR 457
           +LHV+++N+V+QGLC+  D  RAFQ+YLS RTR ISV   +F  LV CFCK+GD+HKAAR
Sbjct: 370 SLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAAR 429

Query: 456 IVSEMVLDGCVPDEDTWNAAVGGFWCRKKARDAADLLQTELMGEFATSK 310
           I+ EMVLDGC+PDE  WN  +GG W RKK R+A + L  EL  +F  ++
Sbjct: 430 ILEEMVLDGCIPDEGVWNVVIGGLWDRKKVREATEQLLVELQQKFVEAE 478


>gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score =  133 bits (334), Expect = 3e-29
 Identities = 60/107 (56%), Positives = 79/107 (73%)
 Frame = -1

Query: 630 HVKINNLVIQGLCSENDLNRAFQVYLSTRTRGISVSAKSFSSLVACFCKKGDVHKAARIV 451
           HVK++N+V+QGLC+  D  RAFQ+YLS RTRGISV   +F  LV CFCK+GD++KAARI+
Sbjct: 372 HVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARIL 431

Query: 450 SEMVLDGCVPDEDTWNAAVGGFWCRKKARDAADLLQTELMGEFATSK 310
            EM+LDGC+PDE  WN  + G W RKK R+  +LL  EL  +F  ++
Sbjct: 432 EEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELLVAELKQKFVEAE 478