BLASTX nr result

ID: Coptis23_contig00035419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035419
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321611.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
gb|ABK96175.1| unknown [Populus trichocarpa]                          169   2e-40
gb|ABK92919.1| unknown [Populus trichocarpa]                          169   2e-40
ref|XP_002282273.2| PREDICTED: uncharacterized protein LOC100250...   168   5e-40
emb|CBI15007.3| unnamed protein product [Vitis vinifera]              168   5e-40

>ref|XP_002321611.1| predicted protein [Populus trichocarpa] gi|222868607|gb|EEF05738.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  169 bits (429), Expect = 2e-40
 Identities = 72/108 (66%), Positives = 89/108 (82%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3   STCNSIIRGGKGNGFVVESWRAPYLNPAPDNIFMLIGCSARSPLFQGFPEKHLPCRNVSG 182
           STC++++ GGKGNGF VE WR+PY NP  DN+FMLIGCSA+S LFQGFP KHLPCRNVSG
Sbjct: 94  STCDTLVLGGKGNGFAVEQWRSPYFNPTADNVFMLIGCSAQSSLFQGFPGKHLPCRNVSG 153

Query: 183 MGCEDYYGCPAWG-PGPTRSSKVYGLSPPECCSVSYDVIRSINLSKLE 323
           MGCE+YYGCPAW   G  +   ++G  PPECC+V+++ IR+INLSKL+
Sbjct: 154 MGCEEYYGCPAWSLAGRGQMGSMFGSGPPECCAVAFEAIRAINLSKLD 201


>gb|ABK96175.1| unknown [Populus trichocarpa]
          Length = 240

 Score =  169 bits (429), Expect = 2e-40
 Identities = 72/108 (66%), Positives = 89/108 (82%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3   STCNSIIRGGKGNGFVVESWRAPYLNPAPDNIFMLIGCSARSPLFQGFPEKHLPCRNVSG 182
           STC++++ GGKGNGF VE WR+PY NP  DN+FMLIGCSA+S LFQGFP KHLPCRNVSG
Sbjct: 34  STCDTLVLGGKGNGFAVEQWRSPYFNPTADNVFMLIGCSAQSSLFQGFPGKHLPCRNVSG 93

Query: 183 MGCEDYYGCPAWG-PGPTRSSKVYGLSPPECCSVSYDVIRSINLSKLE 323
           MGCE+YYGCPAW   G  +   ++G  PPECC+V+++ IR+INLSKL+
Sbjct: 94  MGCEEYYGCPAWSLAGRGQMGSMFGSGPPECCAVAFEAIRAINLSKLD 141


>gb|ABK92919.1| unknown [Populus trichocarpa]
          Length = 300

 Score =  169 bits (429), Expect = 2e-40
 Identities = 72/108 (66%), Positives = 89/108 (82%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3   STCNSIIRGGKGNGFVVESWRAPYLNPAPDNIFMLIGCSARSPLFQGFPEKHLPCRNVSG 182
           STC++++ GGKGNGF VE WR+PY NP  DN+FMLIGCSA+S LFQGFP KHLPCRNVSG
Sbjct: 94  STCDTLVLGGKGNGFAVEQWRSPYFNPTADNVFMLIGCSAQSSLFQGFPGKHLPCRNVSG 153

Query: 183 MGCEDYYGCPAWG-PGPTRSSKVYGLSPPECCSVSYDVIRSINLSKLE 323
           MGCE+YYGCPAW   G  +   ++G  PPECC+V+++ IR+INLSKL+
Sbjct: 154 MGCEEYYGCPAWSLAGRGQMGSMFGSGPPECCAVAFEAIRAINLSKLD 201


>ref|XP_002282273.2| PREDICTED: uncharacterized protein LOC100250137 [Vitis vinifera]
          Length = 306

 Score =  168 bits (425), Expect = 5e-40
 Identities = 74/108 (68%), Positives = 88/108 (81%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3   STCNSIIRGGKGNGFVVESWRAPYLNPAPDNIFMLIGCSARSPLFQGFPEKHLPCRNVSG 182
           STC SI+ GGKGNGF +E WRAPYLNPA DN+FML+GCSA+SPLFQGFP KHLPCRNVSG
Sbjct: 98  STCESIVLGGKGNGFAIEHWRAPYLNPAADNVFMLLGCSAQSPLFQGFPSKHLPCRNVSG 157

Query: 183 MGCEDYYGCPAWGP-GPTRSSKVYGLSPPECCSVSYDVIRSINLSKLE 323
           MGCE+YY C AWG  GP +     G  PPECC+V ++ I++INL++LE
Sbjct: 158 MGCEEYYWCSAWGVFGPKKLGS--GTGPPECCAVPFEAIKAINLTRLE 203


>emb|CBI15007.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  168 bits (425), Expect = 5e-40
 Identities = 74/108 (68%), Positives = 88/108 (81%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3   STCNSIIRGGKGNGFVVESWRAPYLNPAPDNIFMLIGCSARSPLFQGFPEKHLPCRNVSG 182
           STC SI+ GGKGNGF +E WRAPYLNPA DN+FML+GCSA+SPLFQGFP KHLPCRNVSG
Sbjct: 34  STCESIVLGGKGNGFAIEHWRAPYLNPAADNVFMLLGCSAQSPLFQGFPSKHLPCRNVSG 93

Query: 183 MGCEDYYGCPAWGP-GPTRSSKVYGLSPPECCSVSYDVIRSINLSKLE 323
           MGCE+YY C AWG  GP +     G  PPECC+V ++ I++INL++LE
Sbjct: 94  MGCEEYYWCSAWGVFGPKKLGS--GTGPPECCAVPFEAIKAINLTRLE 139


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