BLASTX nr result

ID: Coptis23_contig00035415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035415
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243...   379   e-103
ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265...   379   e-103
emb|CBI27491.3| unnamed protein product [Vitis vinifera]              379   e-103
ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|2...   369   e-100
ref|XP_002518800.1| conserved hypothetical protein [Ricinus comm...   363   2e-98

>ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243095 [Vitis vinifera]
          Length = 2788

 Score =  379 bits (973), Expect = e-103
 Identities = 191/245 (77%), Positives = 210/245 (85%), Gaps = 2/245 (0%)
 Frame = +3

Query: 3    KMHNGHFDLADFVNDLHRRLRLGCYGGQLIDFVYIDEVQDLTMRQIALFKYICRNTEEGF 182
            KM  G FDLAD V DLHRRLR   Y G ++DFVYIDEVQDLTMRQIALFKYICRN  EGF
Sbjct: 1369 KMEKGEFDLADLVIDLHRRLRHERYMGDVMDFVYIDEVQDLTMRQIALFKYICRNVNEGF 1428

Query: 183  VFSGDTAQTIARGIDFRFQDIKSLFYNEFLVGFQSDNQPR--VSDIFHLSQNFRTHAGVL 356
            VFSGDTAQTIARGIDFRFQDI+SLF+NEF++      + +  VS+IFHLSQNFRTHAGVL
Sbjct: 1429 VFSGDTAQTIARGIDFRFQDIRSLFHNEFVMESSDGRKEKGQVSEIFHLSQNFRTHAGVL 1488

Query: 357  NLAQSVIEILYRYFPLSVDILSPETSLIYGEAPVLLESENDENVIVTIFGNSGISGGYMA 536
             L+QSVIE+LYR+FP SVDILSPETSLIYGEAPVLL+   DEN I+T+FGNS   GG   
Sbjct: 1489 KLSQSVIELLYRFFPQSVDILSPETSLIYGEAPVLLKPGKDENAIITMFGNSQNVGGNRF 1548

Query: 537  GFGAEQVILVRDDCARKEISDYVGKQALVLTILECKGLEFQDVLLYNFFGTSPLRNQWRV 716
            GFGAEQVILVRDDCARKEIS Y+GKQALVLTILECKGLEFQDVLLYNFFG+SPL+N WRV
Sbjct: 1549 GFGAEQVILVRDDCARKEISGYIGKQALVLTILECKGLEFQDVLLYNFFGSSPLKNHWRV 1608

Query: 717  VYEYM 731
            +YEYM
Sbjct: 1609 IYEYM 1613


>ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265010 [Vitis vinifera]
          Length = 2792

 Score =  379 bits (973), Expect = e-103
 Identities = 190/248 (76%), Positives = 209/248 (84%), Gaps = 5/248 (2%)
 Frame = +3

Query: 3    KMHNGHFDLADFVNDLHRRLRLGCYGGQLIDFVYIDEVQDLTMRQIALFKYICRNTEEGF 182
            KM  G FDLAD V DLH RLR   Y G  +DFVYIDEVQDLTMRQIALFKY+CRN  EGF
Sbjct: 1348 KMERGEFDLADLVIDLHHRLRQQRYMGDEMDFVYIDEVQDLTMRQIALFKYVCRNVNEGF 1407

Query: 183  VFSGDTAQTIARGIDFRFQDIKSLFYNEFLVGFQSDNQPR-----VSDIFHLSQNFRTHA 347
            VFSGDTAQTIARGIDFRFQDI+SLFYNEF++        R     +S+IFHLSQNFRTHA
Sbjct: 1408 VFSGDTAQTIARGIDFRFQDIRSLFYNEFVMESSDGRDGRKEKGQISEIFHLSQNFRTHA 1467

Query: 348  GVLNLAQSVIEILYRYFPLSVDILSPETSLIYGEAPVLLESENDENVIVTIFGNSGISGG 527
            GVL L+QSVI++LYR+FP S+D+LSPETS IYGEAPVLLE   DEN I+T+FGNS   GG
Sbjct: 1468 GVLKLSQSVIDLLYRFFPQSIDVLSPETSEIYGEAPVLLEPGKDENAIITMFGNSQNIGG 1527

Query: 528  YMAGFGAEQVILVRDDCARKEISDYVGKQALVLTILECKGLEFQDVLLYNFFGTSPLRNQ 707
             M GFGAEQVILVRDDC+RKEISDYVG+QALVLTILECKGLEFQDVLLYNFFG+SPL+NQ
Sbjct: 1528 SMVGFGAEQVILVRDDCSRKEISDYVGEQALVLTILECKGLEFQDVLLYNFFGSSPLKNQ 1587

Query: 708  WRVVYEYM 731
            WRVVYEYM
Sbjct: 1588 WRVVYEYM 1595


>emb|CBI27491.3| unnamed protein product [Vitis vinifera]
          Length = 6100

 Score =  379 bits (973), Expect = e-103
 Identities = 191/245 (77%), Positives = 210/245 (85%), Gaps = 2/245 (0%)
 Frame = +3

Query: 3    KMHNGHFDLADFVNDLHRRLRLGCYGGQLIDFVYIDEVQDLTMRQIALFKYICRNTEEGF 182
            KM  G FDLAD V DLHRRLR   Y G ++DFVYIDEVQDLTMRQIALFKYICRN  EGF
Sbjct: 4752 KMEKGEFDLADLVIDLHRRLRHERYMGDVMDFVYIDEVQDLTMRQIALFKYICRNVNEGF 4811

Query: 183  VFSGDTAQTIARGIDFRFQDIKSLFYNEFLVGFQSDNQPR--VSDIFHLSQNFRTHAGVL 356
            VFSGDTAQTIARGIDFRFQDI+SLF+NEF++      + +  VS+IFHLSQNFRTHAGVL
Sbjct: 4812 VFSGDTAQTIARGIDFRFQDIRSLFHNEFVMESSDGRKEKGQVSEIFHLSQNFRTHAGVL 4871

Query: 357  NLAQSVIEILYRYFPLSVDILSPETSLIYGEAPVLLESENDENVIVTIFGNSGISGGYMA 536
             L+QSVIE+LYR+FP SVDILSPETSLIYGEAPVLL+   DEN I+T+FGNS   GG   
Sbjct: 4872 KLSQSVIELLYRFFPQSVDILSPETSLIYGEAPVLLKPGKDENAIITMFGNSQNVGGNRF 4931

Query: 537  GFGAEQVILVRDDCARKEISDYVGKQALVLTILECKGLEFQDVLLYNFFGTSPLRNQWRV 716
            GFGAEQVILVRDDCARKEIS Y+GKQALVLTILECKGLEFQDVLLYNFFG+SPL+N WRV
Sbjct: 4932 GFGAEQVILVRDDCARKEISGYIGKQALVLTILECKGLEFQDVLLYNFFGSSPLKNHWRV 4991

Query: 717  VYEYM 731
            +YEYM
Sbjct: 4992 IYEYM 4996



 Score =  318 bits (816), Expect = 5e-85
 Identities = 160/249 (64%), Positives = 200/249 (80%), Gaps = 6/249 (2%)
 Frame = +3

Query: 3    KMHNGHFDLADFVNDLHRRLRLGCYGGQLIDFVYIDEVQDLTMRQIALFKYICRNTEEGF 182
            K   G +DL+D V DLH RLR   Y G  IDFVYIDEVQDLTMRQIALFKY+ +N +EGF
Sbjct: 575  KFKKGEYDLSDLVMDLHFRLRSERYEGDHIDFVYIDEVQDLTMRQIALFKYVSKNIDEGF 634

Query: 183  VFSGDTAQTIARGIDFRFQDIKSLFYNEFLVGFQSD------NQPRVSDIFHLSQNFRTH 344
            VFSGDTAQTIA+G+ FRFQDI+ LF+ EF++G ++D       + ++S IFHLSQNFRTH
Sbjct: 635  VFSGDTAQTIAKGVHFRFQDIRHLFFKEFVLGSRTDATDEKKEKGKLSKIFHLSQNFRTH 694

Query: 345  AGVLNLAQSVIEILYRYFPLSVDILSPETSLIYGEAPVLLESENDENVIVTIFGNSGISG 524
            AGVLNLAQS+I++LY +FPL++D+L+PETSLI GEAPVL+E  N  + + TIFG+S  + 
Sbjct: 695  AGVLNLAQSIIDLLYHFFPLTIDVLNPETSLINGEAPVLIECGNFRDALPTIFGDSE-NA 753

Query: 525  GYMAGFGAEQVILVRDDCARKEISDYVGKQALVLTILECKGLEFQDVLLYNFFGTSPLRN 704
                GFGAEQVILVR+D A++EIS YVGK+ALVLTILECKGLEF+DVLL NFFG+ P ++
Sbjct: 754  QENVGFGAEQVILVRNDSAKEEISKYVGKKALVLTILECKGLEFRDVLLCNFFGSCPFKH 813

Query: 705  QWRVVYEYM 731
             WRV+Y++M
Sbjct: 814  HWRVLYQFM 822



 Score =  283 bits (723), Expect = 3e-74
 Identities = 149/234 (63%), Positives = 185/234 (79%), Gaps = 6/234 (2%)
 Frame = +3

Query: 3    KMHNGHFDLADFVNDLHRRLRLGCYGGQLIDFVYIDEVQDLTMRQIALFKYICRNTEEGF 182
            K H+G     D++     R+    Y G  IDFVYIDEVQDLTMRQIALFKY+ +N +EGF
Sbjct: 2225 KAHDGRLSREDYLLLSEARVNER-YEGDHIDFVYIDEVQDLTMRQIALFKYVSKNIDEGF 2283

Query: 183  VFSGDTAQTIARGIDFRFQDIKSLFYNEFLVGFQSD------NQPRVSDIFHLSQNFRTH 344
            VFSGDTAQTIA+G+ FRFQDI+ LF+ EF++G ++D       + ++S IFHLSQNFRTH
Sbjct: 2284 VFSGDTAQTIAKGVHFRFQDIRHLFFKEFVLGSRTDATDEKKEKGKLSKIFHLSQNFRTH 2343

Query: 345  AGVLNLAQSVIEILYRYFPLSVDILSPETSLIYGEAPVLLESENDENVIVTIFGNSGISG 524
            AGVLNLAQS+I++LY +FPL++D L+PETSLI GEAPVL+E  N ++ + TIFG+S  + 
Sbjct: 2344 AGVLNLAQSIIDLLYHFFPLTIDELNPETSLINGEAPVLIECGNFKDALSTIFGDSENAK 2403

Query: 525  GYMAGFGAEQVILVRDDCARKEISDYVGKQALVLTILECKGLEFQDVLLYNFFG 686
            G  AGFGAEQVILVR+D A++EIS YVGK+ALVLTILECKGLEF+DVLL NFFG
Sbjct: 2404 G-NAGFGAEQVILVRNDSAKEEISKYVGKKALVLTILECKGLEFRDVLLCNFFG 2456


>ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|222851386|gb|EEE88933.1|
            predicted protein [Populus trichocarpa]
          Length = 1950

 Score =  369 bits (946), Expect = e-100
 Identities = 183/248 (73%), Positives = 208/248 (83%), Gaps = 5/248 (2%)
 Frame = +3

Query: 3    KMHNGHFDLADFVNDLHRRLRLGCYGGQLIDFVYIDEVQDLTMRQIALFKYICRNTEEGF 182
            K  NG FD+ADFVNDLH RL+   Y G  +DFVYIDEVQDLTMRQIALFKYICRN +EGF
Sbjct: 1203 KAENGDFDMADFVNDLHLRLKTYKYEGDAMDFVYIDEVQDLTMRQIALFKYICRNVDEGF 1262

Query: 183  VFSGDTAQTIARGIDFRFQDIKSLFYNEFLVGFQSDNQPR-----VSDIFHLSQNFRTHA 347
            VF GDTAQTIARGIDFRF+DI+SLFY EF++  +S    R     +S IFHL+QNFRTHA
Sbjct: 1263 VFCGDTAQTIARGIDFRFEDIRSLFYKEFVLASRSAGNDRNEKGQISKIFHLNQNFRTHA 1322

Query: 348  GVLNLAQSVIEILYRYFPLSVDILSPETSLIYGEAPVLLESENDENVIVTIFGNSGISGG 527
            GVLNLAQSVI++LYR+FP  +D+LS ETSLIYGEAP+LLES NDEN IVTIFGNSG    
Sbjct: 1323 GVLNLAQSVIDLLYRFFPSFIDVLSHETSLIYGEAPILLESGNDENAIVTIFGNSGNVRS 1382

Query: 528  YMAGFGAEQVILVRDDCARKEISDYVGKQALVLTILECKGLEFQDVLLYNFFGTSPLRNQ 707
               GFGAEQVILVRDD A+KEI +YVGK ALVLT++ECKGLEFQDVLLYNFFG+SPL+N+
Sbjct: 1383 NFVGFGAEQVILVRDDAAKKEIDNYVGKHALVLTVVECKGLEFQDVLLYNFFGSSPLKNK 1442

Query: 708  WRVVYEYM 731
            WRVVYE+M
Sbjct: 1443 WRVVYEFM 1450


>ref|XP_002518800.1| conserved hypothetical protein [Ricinus communis]
            gi|223542181|gb|EEF43725.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2820

 Score =  363 bits (932), Expect = 2e-98
 Identities = 183/247 (74%), Positives = 212/247 (85%), Gaps = 4/247 (1%)
 Frame = +3

Query: 3    KMHNGHFDLADFVNDLHRRLRLGCYGGQLIDFVYIDEVQDLTMRQIALFKYICRNTEEGF 182
            K+ NG FDLAD V D+HRRL+   Y G+++DFVYIDEVQDLTMRQ+ALFK+I +N  EGF
Sbjct: 1377 KIANGDFDLADIVIDVHRRLKNEKYAGEMMDFVYIDEVQDLTMRQVALFKHISKNVNEGF 1436

Query: 183  VFSGDTAQTIARGIDFRFQDIKSLFYNEFLVGFQS---DNQPRVSDIFHLSQNFRTHAGV 353
            VFSGDTAQTIARGIDFRF+DI+SLFYNEF++G  S   D + ++S IFHLSQNFRTH GV
Sbjct: 1437 VFSGDTAQTIARGIDFRFEDIRSLFYNEFVLGSLSEGVDGKGQISKIFHLSQNFRTHVGV 1496

Query: 354  LNLAQSVIEILYRYFPLSVDILSPETSLIYGEAPVLLES-ENDENVIVTIFGNSGISGGY 530
            L LAQSVI++LYR+FP  VDIL+ ETS I+GEAP+LLES ++DEN IVTIFGN+G  GG 
Sbjct: 1497 LKLAQSVIDLLYRFFPTFVDILNHETSQIFGEAPILLESGDDDENAIVTIFGNNGNIGGS 1556

Query: 531  MAGFGAEQVILVRDDCARKEISDYVGKQALVLTILECKGLEFQDVLLYNFFGTSPLRNQW 710
              GFGAEQVILVRDD ARKEI  YVGKQALVLTI+ECKGLEFQDVLLYNFFG+SPLRN+W
Sbjct: 1557 FVGFGAEQVILVRDDSARKEICKYVGKQALVLTIVECKGLEFQDVLLYNFFGSSPLRNKW 1616

Query: 711  RVVYEYM 731
            RV+YEYM
Sbjct: 1617 RVLYEYM 1623


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