BLASTX nr result

ID: Coptis23_contig00035408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035408
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30818.3| unnamed protein product [Vitis vinifera]               93   3e-17
ref|XP_002271932.1| PREDICTED: carboxyl-terminal-processing prot...    93   3e-17
gb|AFK39374.1| unknown [Medicago truncatula]                           90   2e-16
ref|XP_003629902.1| Carboxyl-terminal-processing protease [Medic...    90   2e-16
ref|XP_003629901.1| Carboxyl-terminal-processing protease [Medic...    90   2e-16

>emb|CBI30818.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/65 (70%), Positives = 53/65 (81%)
 Frame = +2

Query: 218 LVTNEGIVEEAWEIVKETFLDSTSKHRWSLDDWMQRKNDIIGSTISTRSKAHGIIRWMLA 397
           LVTNE IVEEAW IV ++FLDS S+ RWS D W Q+K DI+G++I TRSKAH IIR MLA
Sbjct: 127 LVTNEAIVEEAWNIVNDSFLDS-SRRRWSSDIWKQKKEDILGTSIQTRSKAHDIIRRMLA 185

Query: 398 SLGDP 412
           SLGDP
Sbjct: 186 SLGDP 190


>ref|XP_002271932.1| PREDICTED: carboxyl-terminal-processing protease [Vitis vinifera]
          Length = 462

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/65 (70%), Positives = 53/65 (81%)
 Frame = +2

Query: 218 LVTNEGIVEEAWEIVKETFLDSTSKHRWSLDDWMQRKNDIIGSTISTRSKAHGIIRWMLA 397
           LVTNE IVEEAW IV ++FLDS S+ RWS D W Q+K DI+G++I TRSKAH IIR MLA
Sbjct: 89  LVTNEAIVEEAWNIVNDSFLDS-SRRRWSSDIWKQKKEDILGTSIQTRSKAHDIIRRMLA 147

Query: 398 SLGDP 412
           SLGDP
Sbjct: 148 SLGDP 152


>gb|AFK39374.1| unknown [Medicago truncatula]
          Length = 465

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/65 (64%), Positives = 53/65 (81%)
 Frame = +2

Query: 218 LVTNEGIVEEAWEIVKETFLDSTSKHRWSLDDWMQRKNDIIGSTISTRSKAHGIIRWMLA 397
           +VTNEG+V+EAW+IV + FLD T ++RWS D W  +KNDI+ +TI TRSKAH II+ MLA
Sbjct: 92  VVTNEGLVQEAWQIVDDDFLD-TGRNRWSQDTWQLKKNDILSNTIQTRSKAHNIIKRMLA 150

Query: 398 SLGDP 412
           SLGDP
Sbjct: 151 SLGDP 155


>ref|XP_003629902.1| Carboxyl-terminal-processing protease [Medicago truncatula]
           gi|355523924|gb|AET04378.1| Carboxyl-terminal-processing
           protease [Medicago truncatula]
          Length = 356

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/65 (64%), Positives = 53/65 (81%)
 Frame = +2

Query: 218 LVTNEGIVEEAWEIVKETFLDSTSKHRWSLDDWMQRKNDIIGSTISTRSKAHGIIRWMLA 397
           +VTNEG+V+EAW+IV + FLD T ++RWS D W  +KNDI+ +TI TRSKAH II+ MLA
Sbjct: 92  VVTNEGLVQEAWQIVDDDFLD-TGRNRWSQDTWQLKKNDILSNTIQTRSKAHNIIKRMLA 150

Query: 398 SLGDP 412
           SLGDP
Sbjct: 151 SLGDP 155


>ref|XP_003629901.1| Carboxyl-terminal-processing protease [Medicago truncatula]
           gi|355523923|gb|AET04377.1| Carboxyl-terminal-processing
           protease [Medicago truncatula]
          Length = 465

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/65 (64%), Positives = 53/65 (81%)
 Frame = +2

Query: 218 LVTNEGIVEEAWEIVKETFLDSTSKHRWSLDDWMQRKNDIIGSTISTRSKAHGIIRWMLA 397
           +VTNEG+V+EAW+IV + FLD T ++RWS D W  +KNDI+ +TI TRSKAH II+ MLA
Sbjct: 92  VVTNEGLVQEAWQIVDDDFLD-TGRNRWSQDTWQLKKNDILSNTIQTRSKAHNIIKRMLA 150

Query: 398 SLGDP 412
           SLGDP
Sbjct: 151 SLGDP 155


Top