BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035406
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    71   8e-11
gb|ABA96203.1| retrotransposon protein, putative, unclassified, ...    66   3e-09
ref|XP_002449769.1| hypothetical protein SORBIDRAFT_05g022920 [S...    66   3e-09
gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japo...    66   3e-09
gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indi...    66   3e-09

>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/107 (34%), Positives = 61/107 (57%)
 Frame = -1

Query: 322  LKRRRNDMNLLIQTNGVELITIPAIGEHLLKHYSELLTSSEPNLDLELMEVIQPMVSEFD 143
            L++ RN +  +    G+E      IG+    ++++L T+++ +   E++  I P V+E  
Sbjct: 723  LRKSRNRIKAITDAQGIENFRDDTIGKVAENYFADLFTTTQTSDWEEIISGIAPKVTEQM 782

Query: 142  NEELLKPVTIDEINNAIKNIGSYKAPSLDGFHAFFYKKFWDEVGNKV 2
            N ELL+ VT  E+ +A+  IG+ +AP  DGF A FY   WD +GN V
Sbjct: 783  NHELLQSVTDQEVRDAVFAIGADRAPGFDGFTAAFYHHLWDLIGNDV 829


>gb|ABA96203.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 1378

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/99 (32%), Positives = 57/99 (57%)
 Frame = -1

Query: 319 KRRRNDMNLLIQTNGVELITIPAIGEHLLKHYSELLTSSEPNLDLELMEVIQPMVSEFDN 140
           +++RN +  L+   GV    +  +G  + +++ +L TS    +D E+++ +   VS   N
Sbjct: 135 RKKRNLVKGLVDDQGVRHEDMQTMGAMVKEYFEKLFTSEVMEIDDEILDDVDRKVSVEMN 194

Query: 139 EELLKPVTIDEINNAIKNIGSYKAPSLDGFHAFFYKKFW 23
           + LL P + +E+  A+ +IG  KAP  DG HA F+K+FW
Sbjct: 195 QLLLAPFSKEEVKKALFSIGDLKAPGPDGLHAIFFKRFW 233


>ref|XP_002449769.1| hypothetical protein SORBIDRAFT_05g022920 [Sorghum bicolor]
           gi|241935612|gb|EES08757.1| hypothetical protein
           SORBIDRAFT_05g022920 [Sorghum bicolor]
          Length = 705

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/106 (32%), Positives = 58/106 (54%)
 Frame = -1

Query: 319 KRRRNDMNLLIQTNGVELITIPAIGEHLLKHYSELLTSSEPNLDLELMEVIQPMVSEFDN 140
           +RRRN +  L +  GV +       + +  H+ +L  +        L++ + PMV+   N
Sbjct: 214 ERRRNRIGKLEKEEGVWVEDEVEKQDFITNHFMQLFKAGTVGDTQRLLQAVSPMVTMEMN 273

Query: 139 EELLKPVTIDEINNAIKNIGSYKAPSLDGFHAFFYKKFWDEVGNKV 2
           E L++  + +E+ +A+ +IG  KAP  DG  A FYK+FW  VG++V
Sbjct: 274 EALMREFSPEEVKSALDSIGDLKAPGPDGMPALFYKRFWGTVGDQV 319


>gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japonica Group]
          Length = 1395

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/99 (32%), Positives = 57/99 (57%)
 Frame = -1

Query: 319 KRRRNDMNLLIQTNGVELITIPAIGEHLLKHYSELLTSSEPNLDLELMEVIQPMVSEFDN 140
           +++RN +  L+   GV    +  +G  + +++ +L TS    +D E+++ +   VS   N
Sbjct: 135 RKKRNLVKGLVDDQGVRHEDMQTMGAMVKEYFEKLFTSEVMEIDDEILDDVDRKVSVEMN 194

Query: 139 EELLKPVTIDEINNAIKNIGSYKAPSLDGFHAFFYKKFW 23
           + LL P + +E+  A+ +IG  KAP  DG HA F+K+FW
Sbjct: 195 QLLLAPFSKEEVKKALFSIGDLKAPGPDGLHAIFFKRFW 233


>gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indica Group]
          Length = 1546

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/99 (32%), Positives = 57/99 (57%)
 Frame = -1

Query: 319 KRRRNDMNLLIQTNGVELITIPAIGEHLLKHYSELLTSSEPNLDLELMEVIQPMVSEFDN 140
           +++RN +  L+   GV    +  +G  + +++ +L TS    +D E+++ +   VS   N
Sbjct: 135 RKKRNLVKGLVDDQGVRHEDMQTMGAMVKEYFEKLFTSEVMEIDDEILDDVDRKVSVEMN 194

Query: 139 EELLKPVTIDEINNAIKNIGSYKAPSLDGFHAFFYKKFW 23
           + LL P + +E+  A+ +IG  KAP  DG HA F+K+FW
Sbjct: 195 QLLLAPFSKEEVKKALFSIGDLKAPGPDGLHAIFFKRFW 233