BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035384
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   210   8e-53
emb|CBI17056.3| unnamed protein product [Vitis vinifera]              210   8e-53
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...   207   5e-52
ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic ...   207   7e-52
ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [...   206   1e-51

>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
           vinifera]
          Length = 2214

 Score =  210 bits (535), Expect = 8e-53
 Identities = 100/135 (74%), Positives = 116/135 (85%)
 Frame = +2

Query: 8   KRDYRNPKKQKLFRTAEEEREAKFGFDIFSQGDKRLGWLLTFSSSSWEDQDTRRVYSCVD 187
           + D    KKQKL R AEEE E+K G D+FS+G+KRLGWLLTF+SSSWED++T +VYSCVD
Sbjct: 10  RADVWKHKKQKLIRNAEEEVESKLGLDLFSEGEKRLGWLLTFASSSWEDEETHKVYSCVD 69

Query: 188 LYFVTQDGSNFKCKYRFKPYFYAATKDGTEMGVETYLKRRYEGQIADIELTRKEDLNLKN 367
           LYFV+QDGS+FK KY+F+PYFYAATKD  EM VE YL+RRYEGQIADIE+  KEDL+LKN
Sbjct: 70  LYFVSQDGSSFKSKYKFRPYFYAATKDKMEMDVEAYLRRRYEGQIADIEIMYKEDLDLKN 129

Query: 368 HLSGLQKSYLKISFD 412
           HLSGL KSYLKISFD
Sbjct: 130 HLSGLCKSYLKISFD 144


>emb|CBI17056.3| unnamed protein product [Vitis vinifera]
          Length = 2723

 Score =  210 bits (535), Expect = 8e-53
 Identities = 100/135 (74%), Positives = 116/135 (85%)
 Frame = +2

Query: 8   KRDYRNPKKQKLFRTAEEEREAKFGFDIFSQGDKRLGWLLTFSSSSWEDQDTRRVYSCVD 187
           + D    KKQKL R AEEE E+K G D+FS+G+KRLGWLLTF+SSSWED++T +VYSCVD
Sbjct: 10  RADVWKHKKQKLIRNAEEEVESKLGLDLFSEGEKRLGWLLTFASSSWEDEETHKVYSCVD 69

Query: 188 LYFVTQDGSNFKCKYRFKPYFYAATKDGTEMGVETYLKRRYEGQIADIELTRKEDLNLKN 367
           LYFV+QDGS+FK KY+F+PYFYAATKD  EM VE YL+RRYEGQIADIE+  KEDL+LKN
Sbjct: 70  LYFVSQDGSSFKSKYKFRPYFYAATKDKMEMDVEAYLRRRYEGQIADIEIMYKEDLDLKN 129

Query: 368 HLSGLQKSYLKISFD 412
           HLSGL KSYLKISFD
Sbjct: 130 HLSGLCKSYLKISFD 144


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
           communis] gi|223531477|gb|EEF33309.1| DNA polymerase
           epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score =  207 bits (528), Expect = 5e-52
 Identities = 97/136 (71%), Positives = 117/136 (86%)
 Frame = +2

Query: 2   DQKRDYRNPKKQKLFRTAEEEREAKFGFDIFSQGDKRLGWLLTFSSSSWEDQDTRRVYSC 181
           D+    R+ KKQKL R AEEE ++K GFD+F++GDKRLGWLLTF+SSSWED++TRRV+SC
Sbjct: 10  DRNNYNRSSKKQKLIRNAEEELDSKLGFDLFTEGDKRLGWLLTFASSSWEDEETRRVHSC 69

Query: 182 VDLYFVTQDGSNFKCKYRFKPYFYAATKDGTEMGVETYLKRRYEGQIADIELTRKEDLNL 361
           VDLYFV+QDGS FK K++F+PYFYAATK+  EM VE YL+RRYE QIADIE+  KEDL+L
Sbjct: 70  VDLYFVSQDGSAFKSKFKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEIVEKEDLDL 129

Query: 362 KNHLSGLQKSYLKISF 409
           KNHLSGL+K YLKISF
Sbjct: 130 KNHLSGLRKRYLKISF 145


>ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Glycine
           max]
          Length = 2207

 Score =  207 bits (527), Expect = 7e-52
 Identities = 98/135 (72%), Positives = 117/135 (86%)
 Frame = +2

Query: 8   KRDYRNPKKQKLFRTAEEEREAKFGFDIFSQGDKRLGWLLTFSSSSWEDQDTRRVYSCVD 187
           +RD R  KK+KL RT EEE EAK GFD+FS+G+KRLGWLLTF+SSS +D+D+ +VYSCVD
Sbjct: 10  RRDNRASKKRKLNRTPEEELEAKLGFDLFSEGEKRLGWLLTFASSSVDDEDSYKVYSCVD 69

Query: 188 LYFVTQDGSNFKCKYRFKPYFYAATKDGTEMGVETYLKRRYEGQIADIELTRKEDLNLKN 367
           LYFV QDGS+FK K+RF+PYFY ATKD  E+ VE YLKRRYEGQIAD+E+  KEDL+LKN
Sbjct: 70  LYFVAQDGSSFKTKFRFRPYFYVATKDKMEIDVEAYLKRRYEGQIADVEIIEKEDLDLKN 129

Query: 368 HLSGLQKSYLKISFD 412
           HLSGL+KSYLK+SFD
Sbjct: 130 HLSGLRKSYLKLSFD 144


>ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [Medicago truncatula]
           gi|355507282|gb|AES88424.1| DNA polymerase epsilon
           catalytic subunit A [Medicago truncatula]
          Length = 2248

 Score =  206 bits (525), Expect = 1e-51
 Identities = 96/135 (71%), Positives = 117/135 (86%)
 Frame = +2

Query: 8   KRDYRNPKKQKLFRTAEEEREAKFGFDIFSQGDKRLGWLLTFSSSSWEDQDTRRVYSCVD 187
           +RD +  KKQKL  +AEEE EAK GFD+FS+G+KRLGWLLTFSSSS+ED+DT +VYSC+D
Sbjct: 7   RRDNKVSKKQKLLNSAEEELEAKLGFDLFSEGEKRLGWLLTFSSSSYEDEDTGKVYSCID 66

Query: 188 LYFVTQDGSNFKCKYRFKPYFYAATKDGTEMGVETYLKRRYEGQIADIELTRKEDLNLKN 367
           LYFV QDGS+FK KYRF+PYFY ATK+  EM V+ YL+RRYE QIADI++  KEDL+LKN
Sbjct: 67  LYFVKQDGSSFKTKYRFRPYFYVATKNKMEMDVDAYLRRRYESQIADIKIVEKEDLDLKN 126

Query: 368 HLSGLQKSYLKISFD 412
           HLSGL+KSYL++SFD
Sbjct: 127 HLSGLRKSYLRLSFD 141