BLASTX nr result

ID: Coptis23_contig00035383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035383
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299719.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_002279092.1| PREDICTED: probable peptide transporter At1g...    97   1e-18
emb|CBI36110.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_002318679.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_003529761.1| PREDICTED: probable peptide transporter At1g...    95   7e-18

>ref|XP_002299719.1| predicted protein [Populus trichocarpa] gi|222846977|gb|EEE84524.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/87 (51%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
 Frame = +3

Query: 9   PLYVKVRIHESLFTDLAQVIVAAFRNRNLAFPPENLNG-LRYDSNNLFVAPSNKLRFLNK 185
           P YVK +  +SLFT   QV V A++NR LAFPP + +G   +  ++ F+AP+ KLRFLNK
Sbjct: 120 PFYVKQKPSKSLFTGFIQVPVVAYKNRKLAFPPRDSDGWYHHKRDSKFIAPTTKLRFLNK 179

Query: 186 ACIVRNPDEDFSCDGSAVEPWELCNVD 266
           ACI+RNP++D + DGSA  PW LC ++
Sbjct: 180 ACIIRNPEQDIASDGSASNPWSLCTIE 206


>ref|XP_002279092.1| PREDICTED: probable peptide transporter At1g52190-like [Vitis
           vinifera]
          Length = 584

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 43/87 (49%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +3

Query: 9   PLYVKVRIHESLFTDLAQVIVAAFRNRNLAFPPENLNG-LRYDSNNLFVAPSNKLRFLNK 185
           P Y+K +   SL T   QV+V A++NR LAFPP N +G   Y  ++  V P+++LRFLNK
Sbjct: 229 PFYIKQKASRSLLTGFVQVLVVAYKNRKLAFPPRNTDGWYHYSKDSKLVVPTDRLRFLNK 288

Query: 186 ACIVRNPDEDFSCDGSAVEPWELCNVD 266
           ACI+R+P+ D + DG A  PW LC VD
Sbjct: 289 ACIIRSPERDINSDGLASNPWSLCTVD 315


>emb|CBI36110.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 43/87 (49%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +3

Query: 9   PLYVKVRIHESLFTDLAQVIVAAFRNRNLAFPPENLNG-LRYDSNNLFVAPSNKLRFLNK 185
           P Y+K +   SL T   QV+V A++NR LAFPP N +G   Y  ++  V P+++LRFLNK
Sbjct: 229 PFYIKQKASRSLLTGFVQVLVVAYKNRKLAFPPRNTDGWYHYSKDSKLVVPTDRLRFLNK 288

Query: 186 ACIVRNPDEDFSCDGSAVEPWELCNVD 266
           ACI+R+P+ D + DG A  PW LC VD
Sbjct: 289 ACIIRSPERDINSDGLASNPWSLCTVD 315


>ref|XP_002318679.1| predicted protein [Populus trichocarpa] gi|222859352|gb|EEE96899.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/87 (49%), Positives = 58/87 (66%)
 Frame = +3

Query: 3   GCPLYVKVRIHESLFTDLAQVIVAAFRNRNLAFPPENLNGLRYDSNNLFVAPSNKLRFLN 182
           G  LYVKV+ ++SL    AQV VAA++ +NLA PP       +   +  VAP+ KLRFLN
Sbjct: 239 GSSLYVKVKANKSLVAGFAQVTVAAWKKKNLALPPMEYAAWYHHKGSKLVAPTEKLRFLN 298

Query: 183 KACIVRNPDEDFSCDGSAVEPWELCNV 263
           KAC++ NP++D  CDG A++PW LC V
Sbjct: 299 KACVIGNPEKDLDCDGLAIDPWRLCTV 325


>ref|XP_003529761.1| PREDICTED: probable peptide transporter At1g52190-like [Glycine
           max]
          Length = 606

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 47/89 (52%), Positives = 61/89 (68%), Gaps = 3/89 (3%)
 Frame = +3

Query: 9   PLYVKVRIHESLFTDLAQVIVAAFRNRNLAFPPENLNGL---RYDSNNLFVAPSNKLRFL 179
           PLYVK ++  SL T LAQVIV A++NR L  PP N   +   R DS+   V P++KLRFL
Sbjct: 237 PLYVKNKVQGSLITGLAQVIVVAYKNRKLPLPPRNSAAMYHRRKDSD--LVVPTDKLRFL 294

Query: 180 NKACIVRNPDEDFSCDGSAVEPWELCNVD 266
           NKACI ++P++D + DGSA  PW LC +D
Sbjct: 295 NKACITKDPEKDIASDGSASNPWSLCTID 323


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