BLASTX nr result

ID: Coptis23_contig00035374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035374
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141202.1| PREDICTED: lysosomal beta glucosidase-like [...   114   8e-24
ref|XP_002311926.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
ref|XP_004174067.1| PREDICTED: lysosomal beta glucosidase-like, ...   112   2e-23
ref|XP_004142603.1| PREDICTED: lysosomal beta glucosidase-like [...   112   2e-23
ref|XP_004171886.1| PREDICTED: LOW QUALITY PROTEIN: lysosomal be...   112   4e-23

>ref|XP_004141202.1| PREDICTED: lysosomal beta glucosidase-like [Cucumis sativus]
          Length = 566

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/74 (68%), Positives = 62/74 (83%)
 Frame = -3

Query: 233 FLKEALHFRGFVISDWEGIDRITPTPHSNYTYSIQESINAGVDMVMVPYNYPEFISILTD 54
           FLK  LHF+GFVISDW+GID+IT  PH+NYTYSI  S+NAGVDM+MVPYNY EFI  LT 
Sbjct: 295 FLKNTLHFKGFVISDWQGIDKITTPPHANYTYSILASVNAGVDMIMVPYNYTEFIDGLTY 354

Query: 53  LINKNAIPMNRIEE 12
           L+  NAIP++RI++
Sbjct: 355 LVKNNAIPISRIDD 368


>ref|XP_002311926.1| predicted protein [Populus trichocarpa] gi|222851746|gb|EEE89293.1|
           predicted protein [Populus trichocarpa]
          Length = 634

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/74 (72%), Positives = 62/74 (83%)
 Frame = -3

Query: 233 FLKEALHFRGFVISDWEGIDRITPTPHSNYTYSIQESINAGVDMVMVPYNYPEFISILTD 54
           FLK  L FRGFVISDWEGIDRIT  PH NY+YSI +S+NAGVDMVMVPYNY EFI+ LTD
Sbjct: 301 FLKRKLKFRGFVISDWEGIDRITYPPHKNYSYSILKSVNAGVDMVMVPYNYTEFINGLTD 360

Query: 53  LINKNAIPMNRIEE 12
           L+NK AI + RI++
Sbjct: 361 LVNKKAIRIQRIDD 374


>ref|XP_004174067.1| PREDICTED: lysosomal beta glucosidase-like, partial [Cucumis
           sativus]
          Length = 271

 Score =  112 bits (281), Expect = 2e-23
 Identities = 50/74 (67%), Positives = 61/74 (82%)
 Frame = -3

Query: 233 FLKEALHFRGFVISDWEGIDRITPTPHSNYTYSIQESINAGVDMVMVPYNYPEFISILTD 54
           FLK  LHF+GFVISDWE IDRIT  PH+NYTYSI  SI AG+DM+M+PYNYPEFI  LT+
Sbjct: 99  FLKNTLHFQGFVISDWEAIDRITDPPHANYTYSILASITAGLDMIMIPYNYPEFIDGLTN 158

Query: 53  LINKNAIPMNRIEE 12
           L+  N IP++RI++
Sbjct: 159 LVKSNYIPISRIDD 172


>ref|XP_004142603.1| PREDICTED: lysosomal beta glucosidase-like [Cucumis sativus]
          Length = 725

 Score =  112 bits (281), Expect = 2e-23
 Identities = 50/74 (67%), Positives = 61/74 (82%)
 Frame = -3

Query: 233 FLKEALHFRGFVISDWEGIDRITPTPHSNYTYSIQESINAGVDMVMVPYNYPEFISILTD 54
           FLK  LHF+GFVISDWE IDRIT  PH+NYTYSI  SI AG+DM+M+PYNYPEFI  LT+
Sbjct: 294 FLKNTLHFQGFVISDWEAIDRITDPPHANYTYSILASITAGLDMIMIPYNYPEFIDGLTN 353

Query: 53  LINKNAIPMNRIEE 12
           L+  N IP++RI++
Sbjct: 354 LVKSNYIPISRIDD 367


>ref|XP_004171886.1| PREDICTED: LOW QUALITY PROTEIN: lysosomal beta glucosidase-like
           [Cucumis sativus]
          Length = 628

 Score =  112 bits (279), Expect = 4e-23
 Identities = 50/74 (67%), Positives = 60/74 (81%)
 Frame = -3

Query: 233 FLKEALHFRGFVISDWEGIDRITPTPHSNYTYSIQESINAGVDMVMVPYNYPEFISILTD 54
           FLK  LHF GFVISDWE IDRIT  PH+NYTYSI  SI AG+DM+M+PYNYPEFI  LT+
Sbjct: 295 FLKNTLHFSGFVISDWEAIDRITDPPHANYTYSILASITAGLDMIMIPYNYPEFIDGLTN 354

Query: 53  LINKNAIPMNRIEE 12
           L+  N IP++RI++
Sbjct: 355 LVKSNYIPISRIDD 368


Top