BLASTX nr result
ID: Coptis23_contig00035372
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00035372
(736 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi... 387 e-105
ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi... 385 e-105
emb|CBI30711.3| unnamed protein product [Vitis vinifera] 380 e-103
ref|XP_002870024.1| pentatricopeptide repeat-containing protein ... 374 e-102
gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossyp... 372 e-101
>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 387 bits (993), Expect = e-105
Identities = 180/245 (73%), Positives = 212/245 (86%)
Frame = -1
Query: 736 AFCIFLEMQKEFKPNGVTMACILPACASLSALDRGREIHGYILRNELPLDSYVYNALVDM 557
A +F EMQ+E KP+G T+ACILPACASL+ALD+GREIHGY LRN D YV NA+VDM
Sbjct: 539 ALTLFAEMQRESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDM 598
Query: 556 YAKCGALLLARLLFDMMPAKDLVSWTVMIAGYGMHGCGKDAITIFDQMRSTGLQPDGVSF 377
Y KCG L+LAR LFDM+P KDLVSWTVMIAGYGMHG G +AI F+QMR TG++PD VSF
Sbjct: 599 YVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSF 658
Query: 376 VAILYACSHSGLLVEGWRFYNIMCNDCKMQPKLEHYACMVDLLARAGHLTKAYKFIEAMP 197
++ILYACSHSGLL EGW+ +NIM +C+++P LEHYACMVDLLAR G+L KA+KFI+AMP
Sbjct: 659 ISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMP 718
Query: 196 IKPDSTIWGALLCGCRTHRDVNLAEKVAEKVFELEPDNTGYYILLANIYAEAEKWAEVKK 17
IKPD+TIWGALLCGCR H DV LAEKVAE++FELEP+NTGYY+LLANIYAEAEKW EV+K
Sbjct: 719 IKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQK 778
Query: 16 LRERI 2
LR++I
Sbjct: 779 LRKKI 783
Score = 103 bits (258), Expect = 3e-20
Identities = 71/230 (30%), Positives = 112/230 (48%), Gaps = 5/230 (2%)
Frame = -1
Query: 736 AFCIFLEMQKE-FKPNGVTMACILPACASLSALDRGREIHGYILRNELPLDSYVYNALVD 560
A +F EM+ P+ + IL ACA L G+ +H YI N L +S+V NAL D
Sbjct: 438 AIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTD 497
Query: 559 MYAKCGALLLARLLFDMMPAKDLVSWTVMIAGYGMHGCGKDAITIFDQMRSTGLQPDGVS 380
MYAKCG++ A +F M KD++SW MI GY + +A+T+F +M+ +PDG +
Sbjct: 498 MYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTT 556
Query: 379 FVAILYACSHSGLLVEGWRFYNIMCNDCKMQPKLEHYACMVDLLARAGHLTKAYKFIEAM 200
IL AC+ L +G + + + K A +VD+ + G L A + +
Sbjct: 557 VACILPACASLAALDKGREIHGYALRNGYSEDKYVTNA-VVDMYVKCGLLVLARSLFDMI 615
Query: 199 PIKPDSTIWGALLCGCRTH----RDVNLAEKVAEKVFELEPDNTGYYILL 62
P K D W ++ G H +N ++ ++ +EPD + +L
Sbjct: 616 PNK-DLVSWTVMIAGYGMHGYGSEAINTFNQM--RMTGIEPDEVSFISIL 662
Score = 94.4 bits (233), Expect = 2e-17
Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 2/204 (0%)
Frame = -1
Query: 685 TMACILPACASLSALDRGREIHGYILRNE-LPLDSYVYNALVDMYAKCGALLLARLLFDM 509
TM + ACA++ L G+ +H Y ++ L + N L+DMY+KCG L A +F+
Sbjct: 354 TMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFER 413
Query: 508 MPAKDLVSWTVMIAGYGMHGCGKDAITIFDQMRSTGLQPDGVSFVAILYACSHSGLLVEG 329
M K +VSWT MI GY G AI +FD+M+S G+ PD + +IL AC+ +G L G
Sbjct: 414 MDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSG 473
Query: 328 WRFYNIMCNDCKMQPKLEHYACMVDLLARAGHLTKAYKFIEAMPIKPDSTIWGALLCGCR 149
+ + + ++ + D+ A+ G + A+ M K D W ++ G
Sbjct: 474 -KIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMK-KKDVISWNTMIGGYT 531
Query: 148 THRDVNLAEKV-AEKVFELEPDNT 80
+ N A + AE E +PD T
Sbjct: 532 KNSLPNEALTLFAEMQRESKPDGT 555
Score = 83.2 bits (204), Expect = 5e-14
Identities = 52/184 (28%), Positives = 93/184 (50%), Gaps = 2/184 (1%)
Frame = -1
Query: 700 KPNGVTMACILPACASLSALDRGREIHGYILRNELPLDSY--VYNALVDMYAKCGALLLA 527
KPN T + IL A+++ ++ GR++HG I + L +SY V N+L+ Y + A
Sbjct: 248 KPNSYTFSSILKCFAAVARVEEGRQVHGLICK--LGFNSYNTVVNSLISFYFVGRKVRCA 305
Query: 526 RLLFDMMPAKDLVSWTVMIAGYGMHGCGKDAITIFDQMRSTGLQPDGVSFVAILYACSHS 347
+ LFD + +D++SW MI+GY +G I IF +M G+ D + V + AC++
Sbjct: 306 QKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANI 365
Query: 346 GLLVEGWRFYNIMCNDCKMQPKLEHYACMVDLLARAGHLTKAYKFIEAMPIKPDSTIWGA 167
G L+ G ++ + ++ ++D+ ++ G L A + E M K W +
Sbjct: 366 GTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEK-TVVSWTS 424
Query: 166 LLCG 155
++ G
Sbjct: 425 MITG 428
Score = 67.4 bits (163), Expect = 3e-09
Identities = 36/123 (29%), Positives = 63/123 (51%)
Frame = -1
Query: 673 ILPACASLSALDRGREIHGYILRNELPLDSYVYNALVDMYAKCGALLLARLLFDMMPAKD 494
IL CA ++ GR + I + + +D + LV MY KCG L R++FD +
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESK 215
Query: 493 LVSWTVMIAGYGMHGCGKDAITIFDQMRSTGLQPDGVSFVAILYACSHSGLLVEGWRFYN 314
+ W +MI+ Y G ++I +F QM G++P+ +F +IL + + EG + +
Sbjct: 216 IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHG 275
Query: 313 IMC 305
++C
Sbjct: 276 LIC 278
>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 385 bits (990), Expect = e-105
Identities = 183/245 (74%), Positives = 215/245 (87%)
Frame = -1
Query: 736 AFCIFLEMQKEFKPNGVTMACILPACASLSALDRGREIHGYILRNELPLDSYVYNALVDM 557
A +F+EMQ KPN +TMACILPACASL+AL+RG+EIHG+ILRN LD +V NALVDM
Sbjct: 437 ALNLFVEMQYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDM 496
Query: 556 YAKCGALLLARLLFDMMPAKDLVSWTVMIAGYGMHGCGKDAITIFDQMRSTGLQPDGVSF 377
Y KCGAL LARLLFDM+P KDLVSWTVMIAGYGMHG G +AI F++MR++G++PD VSF
Sbjct: 497 YLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSF 556
Query: 376 VAILYACSHSGLLVEGWRFYNIMCNDCKMQPKLEHYACMVDLLARAGHLTKAYKFIEAMP 197
++ILYACSHSGLL EGW F+N+M N+C ++PK EHYAC+VDLLARAG+L+KAYKFI+ MP
Sbjct: 557 ISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMP 616
Query: 196 IKPDSTIWGALLCGCRTHRDVNLAEKVAEKVFELEPDNTGYYILLANIYAEAEKWAEVKK 17
I+PD+TIWGALLCGCR + DV LAEKVAE VFELEP+NTGYY+LLANIYAEAEKW EVKK
Sbjct: 617 IEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKK 676
Query: 16 LRERI 2
LRERI
Sbjct: 677 LRERI 681
Score = 110 bits (274), Expect = 4e-22
Identities = 65/197 (32%), Positives = 105/197 (53%), Gaps = 2/197 (1%)
Frame = -1
Query: 727 IFLEMQKE-FKPNGVTMACILPACASLSALDRGREIHGYILRNELPLDSYVYNALVDMYA 551
+F EM+KE P+ T+ IL ACA L+ G+++H YI N++ D +V NAL+DMYA
Sbjct: 339 LFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYA 398
Query: 550 KCGALLLARLLFDMMPAKDLVSWTVMIAGYGMHGCGKDAITIFDQMRSTGLQPDGVSFVA 371
KCG++ A +F M KD+VSW MI GY + +A+ +F +M+ +P+ ++
Sbjct: 399 KCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMAC 457
Query: 370 ILYACSHSGLLVEGWRFY-NIMCNDCKMQPKLEHYACMVDLLARAGHLTKAYKFIEAMPI 194
IL AC+ L G + +I+ N + + + +VD+ + G L A + +P
Sbjct: 458 ILPACASLAALERGQEIHGHILRNGFSLDRHVAN--ALVDMYLKCGALGLARLLFDMIPE 515
Query: 193 KPDSTIWGALLCGCRTH 143
K D W ++ G H
Sbjct: 516 K-DLVSWTVMIAGYGMH 531
Score = 103 bits (256), Expect = 5e-20
Identities = 57/177 (32%), Positives = 93/177 (52%)
Frame = -1
Query: 685 TMACILPACASLSALDRGREIHGYILRNELPLDSYVYNALVDMYAKCGALLLARLLFDMM 506
TM ++ C++ L GR +HGY ++ + + N L+DMY+K G L A +F+ M
Sbjct: 253 TMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETM 312
Query: 505 PAKDLVSWTVMIAGYGMHGCGKDAITIFDQMRSTGLQPDGVSFVAILYACSHSGLLVEGW 326
+ +VSWT MIAGY G ++ +F +M G+ PD + IL+AC+ +GLL G
Sbjct: 313 GERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGK 372
Query: 325 RFYNIMCNDCKMQPKLEHYACMVDLLARAGHLTKAYKFIEAMPIKPDSTIWGALLCG 155
+N + + KMQ L ++D+ A+ G + A+ M +K D W ++ G
Sbjct: 373 DVHNYI-KENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVK-DIVSWNTMIGG 427
Score = 77.4 bits (189), Expect = 3e-12
Identities = 55/226 (24%), Positives = 96/226 (42%), Gaps = 49/226 (21%)
Frame = -1
Query: 685 TMACILPACASLSALDRGREIHGYILRNELPLDSYVYNALVDMYAKCGAL---------- 536
T +L CA L ++ GR IH I N++ +D + + LV MY CG L
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 535 ---------LL------------------------------ARLLFDMMPAKDLVSWTVM 473
LL AR LFD + +D++SW M
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 472 IAGYGMHGCGKDAITIFDQMRSTGLQPDGVSFVAILYACSHSGLLVEGWRFYNIMCNDCK 293
I+GY +G + + +F+QM G+ D + V+++ CS++G+L+ G +
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIK-AS 281
Query: 292 MQPKLEHYACMVDLLARAGHLTKAYKFIEAMPIKPDSTIWGALLCG 155
+L C++D+ +++G+L A + E M + W +++ G
Sbjct: 282 FGKELTLNNCLLDMYSKSGNLNSAIQVFETMG-ERSVVSWTSMIAG 326
>emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 380 bits (976), Expect = e-103
Identities = 182/243 (74%), Positives = 214/243 (88%), Gaps = 1/243 (0%)
Frame = -1
Query: 727 IFLEMQKE-FKPNGVTMACILPACASLSALDRGREIHGYILRNELPLDSYVYNALVDMYA 551
+F EM+KE PN +TMACILPACASL+AL+RG+EIHG+ILRN LD +V NALVDMY
Sbjct: 312 LFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYL 371
Query: 550 KCGALLLARLLFDMMPAKDLVSWTVMIAGYGMHGCGKDAITIFDQMRSTGLQPDGVSFVA 371
KCGAL LARLLFDM+P KDLVSWTVMIAGYGMHG G +AI F++MR++G++PD VSF++
Sbjct: 372 KCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFIS 431
Query: 370 ILYACSHSGLLVEGWRFYNIMCNDCKMQPKLEHYACMVDLLARAGHLTKAYKFIEAMPIK 191
ILYACSHSGLL EGW F+N+M N+C ++PK EHYAC+VDLLARAG+L+KAYKFI+ MPI+
Sbjct: 432 ILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIE 491
Query: 190 PDSTIWGALLCGCRTHRDVNLAEKVAEKVFELEPDNTGYYILLANIYAEAEKWAEVKKLR 11
PD+TIWGALLCGCR + DV LAEKVAE VFELEP+NTGYY+LLANIYAEAEKW EVKKLR
Sbjct: 492 PDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLR 551
Query: 10 ERI 2
ERI
Sbjct: 552 ERI 554
Score = 70.5 bits (171), Expect = 3e-10
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Frame = -1
Query: 574 NALVDMYAKCGALLLARLLFDMMPAKDLVSWTVMIAGYGMHGCGKDAITIFDQMRSTGLQ 395
N L+DMY+K G L A +F+ M + +VSWT MIAGY G ++ +F +M L
Sbjct: 263 NCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLF 322
Query: 394 PDGVSFVAILYACSHSGLLVEGWRFY-NIMCNDCKMQPKLEHYACMVDLLARAGHLTKAY 218
P+ ++ IL AC+ L G + +I+ N + + + +VD+ + G L A
Sbjct: 323 PNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVAN--ALVDMYLKCGALGLAR 380
Query: 217 KFIEAMPIKPDSTIWGALLCGCRTH 143
+ +P K D W ++ G H
Sbjct: 381 LLFDMIPEK-DLVSWTVMIAGYGMH 404
Score = 69.7 bits (169), Expect = 6e-10
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 21/198 (10%)
Frame = -1
Query: 685 TMACILPACASLSALDRGREIHGYILRNELPLDSYVYNALVDMYAKCGALLLARLLFDMM 506
T +L CA L ++ GR IH I N++ +D + + LV MY CG L R +FD +
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 505 PAKDLVSWTVMIAGYGMHGCGKDAITIFDQMRSTGLQ--------------PDGVSFVAI 368
+ + W +++ GY G ++++++F +MR G++ D +S+ ++
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 367 LYACSHSGLLVEGWRFYNIMC-----NDCKMQPKLEHYA--CMVDLLARAGHLTKAYKFI 209
+ +GL +G + M D +E C++D+ +++G+L A +
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVF 282
Query: 208 EAMPIKPDSTIWGALLCG 155
E M + W +++ G
Sbjct: 283 ETMG-ERSVVSWTSMIAG 299
>ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297315860|gb|EFH46283.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 871
Score = 374 bits (961), Expect = e-102
Identities = 173/240 (72%), Positives = 211/240 (87%)
Frame = -1
Query: 721 LEMQKEFKPNGVTMACILPACASLSALDRGREIHGYILRNELPLDSYVYNALVDMYAKCG 542
L ++K F P+ T+AC+LPACASLSA D+GREIHGYI+RN D +V N+LVDMYAKCG
Sbjct: 489 LLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG 548
Query: 541 ALLLARLLFDMMPAKDLVSWTVMIAGYGMHGCGKDAITIFDQMRSTGLQPDGVSFVAILY 362
ALLLARLLFD + +KDLVSWTVMIAGYGMHG GK+AI +F+QMR G++PD +SFV++LY
Sbjct: 549 ALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLY 608
Query: 361 ACSHSGLLVEGWRFYNIMCNDCKMQPKLEHYACMVDLLARAGHLTKAYKFIEAMPIKPDS 182
ACSHSGL+ EGWRF+NIM ++CK++P +EHYAC+VD+LAR G+L+KAY+FIE MPI PD+
Sbjct: 609 ACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDA 668
Query: 181 TIWGALLCGCRTHRDVNLAEKVAEKVFELEPDNTGYYILLANIYAEAEKWAEVKKLRERI 2
TIWGALLCGCR H DV LAE+VAEKVFELEP+NTGYY+L+ANIYAEAEKW EVK+LR+RI
Sbjct: 669 TIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRI 728
Score = 99.0 bits (245), Expect = 9e-19
Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 5/227 (2%)
Frame = -1
Query: 727 IFLEMQKE-FKPNGVTMACILPACASLSALDRGREIHGYILRNELPLDSYVYNALVDMYA 551
+F EM++E P+ T+ +L CA LD G+ +H +I N++ D +V NAL+DMYA
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYA 443
Query: 550 KCGALLLARLLFDMMPAKDLVSWTVMIAGYGMHGCGKDAITIFDQMR-STGLQPDGVSFV 374
KCG++ A L+F M KD++SW +I GY + +A+++F+ + PD +
Sbjct: 444 KCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVA 503
Query: 373 AILYACSHSGLLVEGWRFYNIMCNDCKMQPKLEHYA-CMVDLLARAGHLTKAYKFIEAMP 197
+L AC+ +G + + + + H A +VD+ A+ G L A + +
Sbjct: 504 CVLPACASLSAFDKGREIHGYIMRNGYFSDR--HVANSLVDMYAKCGALLLARLLFDDIT 561
Query: 196 IKPDSTIWGALLCGCRTHRDVNLAEKVAEKVFE--LEPDNTGYYILL 62
K D W ++ G H A + ++ + +EPD + LL
Sbjct: 562 SK-DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLL 607
Score = 90.5 bits (223), Expect = 3e-16
Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 1/178 (0%)
Frame = -1
Query: 685 TMACILPACASLSALDRGREIHGYILRNELPLDSYVYNALVDMYAKCGALLLARLLFDMM 506
T+ + CA + GR +H + ++ + N L+DMY+KCG L A+++F M
Sbjct: 298 TIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREM 357
Query: 505 PAKDLVSWTVMIAGYGMHGCGKDAITIFDQMRSTGLQPDGVSFVAILYACSHSGLLVEGW 326
+ +VS+T MIAGY G +A+ +F++M G+ PD + A+L C+ + LL EG
Sbjct: 358 SGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGK 417
Query: 325 RFYN-IMCNDCKMQPKLEHYACMVDLLARAGHLTKAYKFIEAMPIKPDSTIWGALLCG 155
R + I ND + + ++D+ A+ G + +A M +K D W ++ G
Sbjct: 418 RVHEWIKENDMGFDIFVSN--ALMDMYAKCGSMREAELVFSEMRVK-DIISWNTVIGG 472
Score = 81.3 bits (199), Expect = 2e-13
Identities = 70/269 (26%), Positives = 124/269 (46%), Gaps = 33/269 (12%)
Frame = -1
Query: 715 MQKEFKPNGVTMACILPACASLSALDRGREIHGYILRNELPLDSYVYNALVDMYAKCGAL 536
M + + T +C+ + +SL +++ G ++HGYIL++ + V N+LV Y K +
Sbjct: 187 MSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRV 246
Query: 535 LLARLLFDMMPAKDLVSWTVMIAGYGMHGCGKDAITIFDQMRSTGLQPDGVSFVAILYAC 356
AR +FD M +D++SW +I GY +G + +++F QM +G++ D + V++ C
Sbjct: 247 DSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGC 306
Query: 355 SHSGLLVEGW---------------RFYNIM------CNDCKMQP---------KLEHYA 266
+ S L+ G RF N + C D + Y
Sbjct: 307 ADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYT 366
Query: 265 CMVDLLARAGHLTKAYKFIEAMP---IKPDSTIWGALLCGCRTHRDVNLAEKVAEKVFEL 95
M+ AR G +A K E M I PD A+L C +R ++ ++V E + E
Sbjct: 367 SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKE- 425
Query: 94 EPDNTGYYILLANIYAEAEKWAEVKKLRE 8
++ G+ I ++N A + +A+ +RE
Sbjct: 426 --NDMGFDIFVSN--ALMDMYAKCGSMRE 450
Score = 57.8 bits (138), Expect = 2e-06
Identities = 30/106 (28%), Positives = 53/106 (50%)
Frame = -1
Query: 685 TMACILPACASLSALDRGREIHGYILRNELPLDSYVYNALVDMYAKCGALLLARLLFDMM 506
T+ +L CA +L G+E+ +I N LDS + + L MY CG L A +FD +
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQV 155
Query: 505 PAKDLVSWTVMIAGYGMHGCGKDAITIFDQMRSTGLQPDGVSFVAI 368
+ + W +++ G +I +F +M S+G++ D +F +
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCV 201
>gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 372 bits (954), Expect = e-101
Identities = 174/238 (73%), Positives = 205/238 (86%)
Frame = -1
Query: 715 MQKEFKPNGVTMACILPACASLSALDRGREIHGYILRNELPLDSYVYNALVDMYAKCGAL 536
M E KP+ TMACILPACASLSAL+RG+EIHGYILRN D +V NALVD+Y KCG L
Sbjct: 286 MVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVL 345
Query: 535 LLARLLFDMMPAKDLVSWTVMIAGYGMHGCGKDAITIFDQMRSTGLQPDGVSFVAILYAC 356
LARLLFDM+P+KDLVSWTVMIAGYGMHG G +AI F++MR G++PD VSF++ILYAC
Sbjct: 346 GLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYAC 405
Query: 355 SHSGLLVEGWRFYNIMCNDCKMQPKLEHYACMVDLLARAGHLTKAYKFIEAMPIKPDSTI 176
SHSGLL +GWRF+ IM ND ++PKLEHYACMVDLL+R G+L+KAYKFIE +PI PD+TI
Sbjct: 406 SHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATI 465
Query: 175 WGALLCGCRTHRDVNLAEKVAEKVFELEPDNTGYYILLANIYAEAEKWAEVKKLRERI 2
WGALLCGCR + D+ LAEKVAE+VFELEP+NTGYY+LLANIYAEAEKW EVK++RE+I
Sbjct: 466 WGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKI 523
Score = 89.4 bits (220), Expect = 7e-16
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
Frame = -1
Query: 685 TMACILPACASLSALDRGREIHGYILRNELPLDSYVYNALVDMYAKCGALLLARLLFDMM 506
T+ +L CA L G+ +H +++ N L+DMY+KCG L A +F+ M
Sbjct: 115 TIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKM 174
Query: 505 PAKDLVSWTVMIAGYGMHGCGKDAITIFDQMRSTGLQPDGVSFVAILYACSHSGLLVEGW 326
+++VSWT MIAGY G AI + QM G++ D V+ +IL+AC+ SG L G
Sbjct: 175 GERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGK 234
Query: 325 RFYN-IMCNDCKMQPKLEHYACMVDLLARAGHLTKAYKFIEAMPIKPDSTIWGALL 161
++ I N+ M L ++D+ A+ G + A M +K D W ++
Sbjct: 235 DVHDYIKANN--MASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK-DIISWNTMV 287
Score = 89.4 bits (220), Expect = 7e-16
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 4/229 (1%)
Frame = -1
Query: 736 AFCIFLEMQKE-FKPNGVTMACILPACASLSALDRGREIHGYILRNELPLDSYVYNALVD 560
A + +M+KE K + V + IL ACA +LD G+++H YI N + + +V NAL+D
Sbjct: 198 AIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMD 257
Query: 559 MYAKCGALLLARLLFDMMPAKDLVSWTVMIAGYGMHGCGKDAITIFDQMRSTGLQPDGVS 380
MYAKCG++ A +F M KD++SW M+ L+PD +
Sbjct: 258 MYAKCGSMEGANSVFSTMVVKDIISWNTMVG---------------------ELKPDSRT 296
Query: 379 FVAILYACSHSGLLVEGWRFYNIMCNDCKMQPKLEHYA-CMVDLLARAGHLTKAYKFIEA 203
IL AC+ L G + + + + H A +VDL + G L A +
Sbjct: 297 MACILPACASLSALERGKEIHGYILRNGYSSDR--HVANALVDLYVKCGVLGLARLLFDM 354
Query: 202 MPIKPDSTIWGALLCGCRTHRDVNLAEKVAEKVFE--LEPDNTGYYILL 62
+P K D W ++ G H N A ++ + +EPD + +L
Sbjct: 355 IPSK-DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISIL 402
Score = 57.4 bits (137), Expect = 3e-06
Identities = 42/188 (22%), Positives = 86/188 (45%), Gaps = 20/188 (10%)
Frame = -1
Query: 658 ASLSALDRGREIHGYILRNELPLDSYVYNALVDMYAKCG----ALLLARL---------- 521
A+ L GR + + + + Y++N +V YAK G ++ L ++
Sbjct: 7 ATCGDLKEGRRVFDTMEKKNV----YLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKR 62
Query: 520 ------LFDMMPAKDLVSWTVMIAGYGMHGCGKDAITIFDQMRSTGLQPDGVSFVAILYA 359
LFD + +D++SW MI+GY +G + + I+ QM G+ D + +++L
Sbjct: 63 SESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVG 122
Query: 358 CSHSGLLVEGWRFYNIMCNDCKMQPKLEHYACMVDLLARAGHLTKAYKFIEAMPIKPDST 179
C+ SG L G +++ + ++ ++D+ ++ G L A + E M + +
Sbjct: 123 CAKSGTLSLGKAVHSLAIKS-SFERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ERNVV 180
Query: 178 IWGALLCG 155
W +++ G
Sbjct: 181 SWTSMIAG 188