BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035366
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like...   117   1e-24
ref|XP_002523741.1| zinc finger protein, putative [Ricinus commu...   103   2e-20
gb|AAM65773.1| putative RING zinc finger protein [Arabidopsis th...    96   3e-18
ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp....    96   3e-18
ref|NP_188294.1| RING-H2 finger protein ATL2 [Arabidopsis thalia...    96   3e-18

>ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like [Vitis vinifera]
          Length = 244

 Score =  117 bits (293), Expect = 1e-24
 Identities = 59/114 (51%), Positives = 74/114 (64%), Gaps = 12/114 (10%)
 Frame = -3

Query: 378 YSFYIRRFST------------PDPLVISSLRTQLVGSTSSHGLDMSTVQSLPIFGYDGN 235
           +S YIRRF+             P+P   SS R+     T S GLD STV SLP+F Y G+
Sbjct: 73  FSVYIRRFAEDNAVEMSRRRRHPNPPASSSSRSP----TPSKGLDASTVSSLPLFSYHGD 128

Query: 234 AKEAVYCSVCLSEFEEKETVKLIPNCGHVYHSECIDKWFVSHVSCPLCRSIELF 73
           AKE + C VCL++FE+K+TVK+IP C HV+H  CID W  SHVSCP+CRS +LF
Sbjct: 129 AKETLDCPVCLTQFEDKDTVKIIPYCRHVFHPPCIDTWLSSHVSCPVCRSTQLF 182


>ref|XP_002523741.1| zinc finger protein, putative [Ricinus communis]
           gi|223537045|gb|EEF38681.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 254

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/114 (45%), Positives = 67/114 (58%), Gaps = 11/114 (9%)
 Frame = -3

Query: 378 YSFYIRRFST----------PDPLVISSLRTQLVGSTSSHGLDMSTVQSLPIFGY-DGNA 232
           +S YIRRFST          P P   S+ R   V   S  GLD   ++SLP++ Y  G A
Sbjct: 67  FSIYIRRFSTEPASEFTSHHPGPGTPSNQRPSRVVGGSRKGLDPEVIKSLPVYSYYHGEA 126

Query: 231 KEAVYCSVCLSEFEEKETVKLIPNCGHVYHSECIDKWFVSHVSCPLCRSIELFK 70
           K  + C+VCL EFEEKETVK IP C H++H ECI+ W   HV+CP+CR  +  +
Sbjct: 127 KYQIECAVCLGEFEEKETVKSIPYCKHMFHLECIETWLKLHVTCPVCRGTQFLE 180


>gb|AAM65773.1| putative RING zinc finger protein [Arabidopsis thaliana]
          Length = 304

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
 Frame = -3

Query: 357 FSTPDPLVISSLRTQLVGSTSSHGLDMSTVQSLPIFGY-DGNAKEAVYCSVCLSEFEEKE 181
           F T DP   S+  T +V   +S GLD + ++SLP+F + D   K+ + C+VCLSEFEE E
Sbjct: 77  FFTADP---STAATSVV---ASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESE 130

Query: 180 TVKLIPNCGHVYHSECIDKWFVSHVSCPLCRSI 82
           T +++PNC H +H +CID WF SH +CPLCRS+
Sbjct: 131 TGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSL 163


>ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326798|gb|EFH57218.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 234

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 53/119 (44%), Positives = 70/119 (58%), Gaps = 17/119 (14%)
 Frame = -3

Query: 378 YSFYIRRFSTPDPLVISS-------------LRTQLVGS---TSSHGLDMSTVQSLPIFG 247
           +S YI  F     + ISS             L T +V S   +   GLD  TV+SLP++ 
Sbjct: 66  FSVYIHHFVDDSTVEISSIPRTRSSRMSPRRLSTSVVVSRPYSYRRGLDSQTVRSLPVYH 125

Query: 246 YDGNAKEAVY-CSVCLSEFEEKETVKLIPNCGHVYHSECIDKWFVSHVSCPLCRSIELF 73
           Y    K+    C +CLSEFEE ETVK+IP+CGHV+H +C+D W  S+V+CPLCRS +LF
Sbjct: 126 YTKATKQRNEDCVICLSEFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLF 184


>ref|NP_188294.1| RING-H2 finger protein ATL2 [Arabidopsis thaliana]
           gi|68565202|sp|Q8L9T5.2|ATL2_ARATH RecName: Full=RING-H2
           finger protein ATL2; AltName: Full=Protein ARABIDOPSIS
           TOXICOS EN LEVADURA 2; Short=Protein ATL2
           gi|11994627|dbj|BAB02764.1| RING zinc finger
           protein-like [Arabidopsis thaliana]
           gi|17065578|gb|AAL32943.1| RING zinc finger protein-like
           [Arabidopsis thaliana] gi|20148585|gb|AAM10183.1| RING
           zinc finger protein-like [Arabidopsis thaliana]
           gi|70905095|gb|AAZ14073.1| At3g16720 [Arabidopsis
           thaliana] gi|332642336|gb|AEE75857.1| RING-H2 finger
           protein ATL2 [Arabidopsis thaliana]
          Length = 304

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
 Frame = -3

Query: 357 FSTPDPLVISSLRTQLVGSTSSHGLDMSTVQSLPIFGY-DGNAKEAVYCSVCLSEFEEKE 181
           F T DP   S+  T +V   +S GLD + ++SLP+F + D   K+ + C+VCLSEFEE E
Sbjct: 77  FFTADP---STAATSVV---ASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESE 130

Query: 180 TVKLIPNCGHVYHSECIDKWFVSHVSCPLCRSI 82
           T +++PNC H +H +CID WF SH +CPLCRS+
Sbjct: 131 TGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSL 163