BLASTX nr result

ID: Coptis23_contig00035364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035364
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34342.1| Polyprotein, putative [Solanum demissum]               138   4e-31
gb|ABI34329.1| Integrase core domain containing protein [Solanum...   136   2e-30
emb|CAN62623.1| hypothetical protein VITISV_001656 [Vitis vinifera]   135   5e-30
emb|CAN65095.1| hypothetical protein VITISV_011639 [Vitis vinifera]   135   5e-30
ref|XP_002272586.2| PREDICTED: uncharacterized protein LOC100248...   133   1e-29

>gb|ABI34342.1| Polyprotein, putative [Solanum demissum]
          Length = 1054

 Score =  138 bits (348), Expect = 4e-31
 Identities = 65/114 (57%), Positives = 82/114 (71%)
 Frame = +1

Query: 1    KLSSVWLLISLAAQHHWSLHQLDVKNAFLHGDLTEDIYMSQPLGFALQWEYSGKVCRLLK 180
            K++S+ L +S+AA  HW LHQLD+KNAFLHGDL E++YM QP GF  Q E S  VCRL +
Sbjct: 721  KIASIRLFLSMAAVRHWPLHQLDIKNAFLHGDLEEEVYMEQPPGFVAQGESSSLVCRLRR 780

Query: 181  SIFGLKQSPRAWFHRFSTVILSMGFIRCESDHTCFIHRSVANLRTIVLVYVDDI 342
            S++GLKQSPRAWF +FSTVI   G  R  +DH+ F   S  +L   ++VYVDDI
Sbjct: 781  SLYGLKQSPRAWFGKFSTVIQEFGMTRSGADHSVFYRHSAPSLCIYLVVYVDDI 834


>gb|ABI34329.1| Integrase core domain containing protein [Solanum demissum]
          Length = 1775

 Score =  136 bits (343), Expect = 2e-30
 Identities = 65/114 (57%), Positives = 81/114 (71%)
 Frame = +1

Query: 1    KLSSVWLLISLAAQHHWSLHQLDVKNAFLHGDLTEDIYMSQPLGFALQWEYSGKVCRLLK 180
            K++SV L +S+AA  HW LHQLD+KNAFLHGDL E++YM QP GF  Q E S  VCRL +
Sbjct: 960  KIASVRLFLSMAAVRHWPLHQLDIKNAFLHGDLEEEVYMEQPPGFVAQGESSSLVCRLRR 1019

Query: 181  SIFGLKQSPRAWFHRFSTVILSMGFIRCESDHTCFIHRSVANLRTIVLVYVDDI 342
            S++GLKQSPRAWF +FSTVI   G  R  +DH+ F   S  +    ++VYVDDI
Sbjct: 1020 SLYGLKQSPRAWFGKFSTVIQEFGMTRSGADHSVFYRHSAPSRCIYLVVYVDDI 1073


>emb|CAN62623.1| hypothetical protein VITISV_001656 [Vitis vinifera]
          Length = 1394

 Score =  135 bits (339), Expect = 5e-30
 Identities = 65/114 (57%), Positives = 84/114 (73%)
 Frame = +1

Query: 1    KLSSVWLLISLAAQHHWSLHQLDVKNAFLHGDLTEDIYMSQPLGFALQWEYSGKVCRLLK 180
            KL++V +L+SLAA   WSLHQLDVKNAFL+GDL E++YM  P G      ++ KVCRL K
Sbjct: 978  KLNTVRVLLSLAANLDWSLHQLDVKNAFLNGDLEEEVYMDIPAGLETTSNFN-KVCRLRK 1036

Query: 181  SIFGLKQSPRAWFHRFSTVILSMGFIRCESDHTCFIHRSVANLRTIVLVYVDDI 342
            S++GLKQSPRAWF RF+ V+   GF++C+SDHT F+        TI++VYVDDI
Sbjct: 1037 SLYGLKQSPRAWFERFTKVVKGYGFVQCQSDHTLFVKHFPXGKLTIIIVYVDDI 1090


>emb|CAN65095.1| hypothetical protein VITISV_011639 [Vitis vinifera]
          Length = 1377

 Score =  135 bits (339), Expect = 5e-30
 Identities = 65/114 (57%), Positives = 84/114 (73%)
 Frame = +1

Query: 1    KLSSVWLLISLAAQHHWSLHQLDVKNAFLHGDLTEDIYMSQPLGFALQWEYSGKVCRLLK 180
            KL++V +L+SLAA   WSLHQLDVKNAFL+GDL E++YM  P G      ++ KVCRL K
Sbjct: 1012 KLNTVRVLLSLAANLDWSLHQLDVKNAFLNGDLEEEVYMDIPAGLETTSNFN-KVCRLRK 1070

Query: 181  SIFGLKQSPRAWFHRFSTVILSMGFIRCESDHTCFIHRSVANLRTIVLVYVDDI 342
            S++GLKQSPRAWF RF+ V+   GF++C+SDHT F+        TI++VYVDDI
Sbjct: 1071 SLYGLKQSPRAWFERFTKVVKGYGFVQCQSDHTLFVKHFPEGKLTIIIVYVDDI 1124


>ref|XP_002272586.2| PREDICTED: uncharacterized protein LOC100248980 [Vitis vinifera]
          Length = 1123

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/114 (57%), Positives = 84/114 (73%)
 Frame = +1

Query: 1   KLSSVWLLISLAAQHHWSLHQLDVKNAFLHGDLTEDIYMSQPLGFALQWEYSGKVCRLLK 180
           KL+SV L IS+AA   W +HQLD+KNAFLHGDL E++Y+ QP GF  Q EY GKVCRL K
Sbjct: 278 KLNSVRLFISIAASQQWMIHQLDIKNAFLHGDLEEEVYLEQPPGFVAQGEY-GKVCRLKK 336

Query: 181 SIFGLKQSPRAWFHRFSTVILSMGFIRCESDHTCFIHRSVANLRTIVLVYVDDI 342
           +++GLKQSPRAWF +FS  I + G  + E DH+ F  +S A +  +++VYVDDI
Sbjct: 337 ALYGLKQSPRAWFGKFSKKIQTFGMNKSEKDHSVFYKKSAAGI-ILLVVYVDDI 389


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