BLASTX nr result
ID: Coptis23_contig00035360
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00035360
(533 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003601392.1| ABC transporter B family member [Medicago tr... 116 2e-27
dbj|BAB62040.1| CjMDR1 [Coptis japonica] 116 1e-26
ref|XP_003518599.1| PREDICTED: ABC transporter B family member 4... 113 2e-26
emb|CBI26020.3| unnamed protein product [Vitis vinifera] 114 6e-26
ref|XP_002275143.2| PREDICTED: ABC transporter B family member 1... 114 6e-26
>ref|XP_003601392.1| ABC transporter B family member [Medicago truncatula]
gi|355490440|gb|AES71643.1| ABC transporter B family
member [Medicago truncatula]
Length = 1310
Score = 116 bits (291), Expect(2) = 2e-27
Identities = 63/92 (68%), Positives = 77/92 (83%), Gaps = 6/92 (6%)
Frame = -1
Query: 533 QRVAIARAILKEARILLLDEATSALDMESERIVQEALERIMVN*TTVIVAHPLSTVKNSE 354
QRVAIAR+ILK+ RILLLDEATSALD+ESE+IVQEAL++IM+N TTVIVAH LSTV+N+
Sbjct: 548 QRVAIARSILKDPRILLLDEATSALDVESEKIVQEALDKIMINRTTVIVAHRLSTVRNAA 607
Query: 353 TIAVIHQGKIVEKA------RLQSAHLSLVPE 276
TIAVIHQGK+VEK +L S+H+ L +
Sbjct: 608 TIAVIHQGKLVEKGKNTFSLKLTSSHVELTKD 639
Score = 30.8 bits (68), Expect(2) = 2e-27
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -2
Query: 160 KDPDGAYCQLICMQE*KSEPENQ 92
KDPDGAY +LI +QE + E E Q
Sbjct: 638 KDPDGAYSKLISLQETEKEAEVQ 660
Score = 97.8 bits (242), Expect = 9e-19
Identities = 50/73 (68%), Positives = 62/73 (84%)
Frame = -1
Query: 533 QRVAIARAILKEARILLLDEATSALDMESERIVQEALERIMVN*TTVIVAHPLSTVKNSE 354
QRVAIARAILK +ILLLDEATSALD ESE++VQ+AL+R+MV+ TT+IVAH LST+K ++
Sbjct: 1217 QRVAIARAILKNPKILLLDEATSALDAESEKVVQDALDRVMVDRTTIIVAHRLSTIKGAD 1276
Query: 353 TIAVIHQGKIVEK 315
IAV+ G I EK
Sbjct: 1277 LIAVVKNGVITEK 1289
>dbj|BAB62040.1| CjMDR1 [Coptis japonica]
Length = 1289
Score = 116 bits (291), Expect(2) = 1e-26
Identities = 67/94 (71%), Positives = 77/94 (81%)
Frame = -1
Query: 533 QRVAIARAILKEARILLLDEATSALDMESERIVQEALERIMVN*TTVIVAHPLSTVKNSE 354
QR+AIARAILK+ RILLLDEATSALD ESE IVQEAL+RIMVN TTVIVAH LSTV+N++
Sbjct: 539 QRIAIARAILKDPRILLLDEATSALDAESEHIVQEALDRIMVNRTTVIVAHRLSTVRNAD 598
Query: 353 TIAVIHQGKIVEKARLQSAHLSLVPEILAPEPFY 252
TIAVIH+GKIVEK +HL L +L P+ Y
Sbjct: 599 TIAVIHRGKIVEK----GSHLDL---LLNPDGAY 625
Score = 28.5 bits (62), Expect(2) = 1e-26
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -2
Query: 157 DPDGAYCQLICMQE 116
+PDGAYCQLI +QE
Sbjct: 620 NPDGAYCQLIRLQE 633
Score = 98.2 bits (243), Expect = 7e-19
Identities = 50/75 (66%), Positives = 63/75 (84%)
Frame = -1
Query: 533 QRVAIARAILKEARILLLDEATSALDMESERIVQEALERIMVN*TTVIVAHPLSTVKNSE 354
QRVAIARA++K +ILLLDEATSALD ESER+VQ+AL+++MVN TTV VAH LST+KN++
Sbjct: 1192 QRVAIARAMVKAPKILLLDEATSALDAESERVVQDALDKVMVNRTTVWVAHRLSTIKNAD 1251
Query: 353 TIAVIHQGKIVEKAR 309
IAV+ G I EK +
Sbjct: 1252 VIAVVKNGVIAEKGK 1266
>ref|XP_003518599.1| PREDICTED: ABC transporter B family member 4-like [Glycine max]
Length = 1282
Score = 113 bits (283), Expect(2) = 2e-26
Identities = 64/94 (68%), Positives = 75/94 (79%)
Frame = -1
Query: 533 QRVAIARAILKEARILLLDEATSALDMESERIVQEALERIMVN*TTVIVAHPLSTVKNSE 354
QR+AIARAILK RILLLDEATSALD ESERIVQEAL+RIMVN TT+IVAH LSTV+N++
Sbjct: 527 QRIAIARAILKNPRILLLDEATSALDAESERIVQEALDRIMVNRTTIIVAHRLSTVRNAD 586
Query: 353 TIAVIHQGKIVEKARLQSAHLSLVPEILAPEPFY 252
IAVIH+GK+VEK H+ L+ + PE Y
Sbjct: 587 VIAVIHRGKMVEK----GTHIELLKD---PEGAY 613
Score = 30.4 bits (67), Expect(2) = 2e-26
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 160 KDPDGAYCQLICMQE*KSEPENQA 89
KDP+GAY QLI +QE E E A
Sbjct: 607 KDPEGAYSQLIRLQEVNKETEGNA 630
Score = 103 bits (258), Expect = 1e-20
Identities = 52/75 (69%), Positives = 65/75 (86%)
Frame = -1
Query: 533 QRVAIARAILKEARILLLDEATSALDMESERIVQEALERIMVN*TTVIVAHPLSTVKNSE 354
QRVAIARAI+K +ILLLDEATSALD ESER+VQ+AL+++MVN TTV+VAH LST+KN++
Sbjct: 1183 QRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNAD 1242
Query: 353 TIAVIHQGKIVEKAR 309
IAV+ G IVEK +
Sbjct: 1243 VIAVVKNGVIVEKGK 1257
>emb|CBI26020.3| unnamed protein product [Vitis vinifera]
Length = 2226
Score = 114 bits (286), Expect(2) = 6e-26
Identities = 61/86 (70%), Positives = 73/86 (84%)
Frame = -1
Query: 533 QRVAIARAILKEARILLLDEATSALDMESERIVQEALERIMVN*TTVIVAHPLSTVKNSE 354
QRVAIARAILK+ RILLLDEATSALD ESER+VQEAL+R+M+N TT+IVAH LSTV+N++
Sbjct: 429 QRVAIARAILKDPRILLLDEATSALDAESERVVQEALDRVMINRTTIIVAHRLSTVRNAD 488
Query: 353 TIAVIHQGKIVEKARLQSAHLSLVPE 276
IAVIH+GKIVEK AH L+ +
Sbjct: 489 MIAVIHRGKIVEK----GAHSELIKD 510
Score = 27.7 bits (60), Expect(2) = 6e-26
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -2
Query: 160 KDPDGAYCQLICMQE*KSE 104
KDPDGAY LI +QE SE
Sbjct: 509 KDPDGAYSLLIRLQEISSE 527
Score = 113 bits (282), Expect = 2e-23
Identities = 59/73 (80%), Positives = 68/73 (93%)
Frame = -1
Query: 533 QRVAIARAILKEARILLLDEATSALDMESERIVQEALERIMVN*TTVIVAHPLSTVKNSE 354
QRVAIARAILK+ RILLLDEATSALD+ SERIVQEAL+R+M+N TT+IVAH LSTV+N++
Sbjct: 1563 QRVAIARAILKDPRILLLDEATSALDLGSERIVQEALDRVMMNRTTIIVAHRLSTVRNAD 1622
Query: 353 TIAVIHQGKIVEK 315
IAVIHQGKIVEK
Sbjct: 1623 MIAVIHQGKIVEK 1635
Score = 100 bits (249), Expect = 1e-19
Identities = 50/75 (66%), Positives = 64/75 (85%)
Frame = -1
Query: 533 QRVAIARAILKEARILLLDEATSALDMESERIVQEALERIMVN*TTVIVAHPLSTVKNSE 354
QRVAIARAI+K+ +ILLLDEATSALD ESER+VQ+AL+R+MVN TT++VAH LST+K ++
Sbjct: 904 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMVNRTTLVVAHRLSTIKGAD 963
Query: 353 TIAVIHQGKIVEKAR 309
IAV+ G I EK +
Sbjct: 964 LIAVVKNGAIAEKGK 978
>ref|XP_002275143.2| PREDICTED: ABC transporter B family member 11-like [Vitis vinifera]
Length = 1294
Score = 114 bits (286), Expect(2) = 6e-26
Identities = 61/86 (70%), Positives = 73/86 (84%)
Frame = -1
Query: 533 QRVAIARAILKEARILLLDEATSALDMESERIVQEALERIMVN*TTVIVAHPLSTVKNSE 354
QRVAIARAILK+ RILLLDEATSALD ESER+VQEAL+R+M+N TT+IVAH LSTV+N++
Sbjct: 539 QRVAIARAILKDPRILLLDEATSALDAESERVVQEALDRVMINRTTIIVAHRLSTVRNAD 598
Query: 353 TIAVIHQGKIVEKARLQSAHLSLVPE 276
IAVIH+GKIVEK AH L+ +
Sbjct: 599 MIAVIHRGKIVEK----GAHSELIKD 620
Score = 27.7 bits (60), Expect(2) = 6e-26
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -2
Query: 160 KDPDGAYCQLICMQE*KSE 104
KDPDGAY LI +QE SE
Sbjct: 619 KDPDGAYSLLIRLQEISSE 637
Score = 100 bits (249), Expect = 1e-19
Identities = 50/75 (66%), Positives = 64/75 (85%)
Frame = -1
Query: 533 QRVAIARAILKEARILLLDEATSALDMESERIVQEALERIMVN*TTVIVAHPLSTVKNSE 354
QRVAIARAI+K+ +ILLLDEATSALD ESER+VQ+AL+R+MVN TT++VAH LST+K ++
Sbjct: 1196 QRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMVNRTTLVVAHRLSTIKGAD 1255
Query: 353 TIAVIHQGKIVEKAR 309
IAV+ G I EK +
Sbjct: 1256 LIAVVKNGAIAEKGK 1270