BLASTX nr result
ID: Coptis23_contig00035342
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00035342 (288 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002305296.1| predicted protein [Populus trichocarpa] gi|2... 67 2e-09 ref|XP_003524494.1| PREDICTED: uncharacterized protein LOC100799... 58 7e-07 ref|XP_002514605.1| conserved hypothetical protein [Ricinus comm... 57 1e-06 ref|XP_003549581.1| PREDICTED: uncharacterized protein LOC100806... 56 4e-06 ref|XP_002273093.1| PREDICTED: uncharacterized protein LOC100247... 56 4e-06 >ref|XP_002305296.1| predicted protein [Populus trichocarpa] gi|222848260|gb|EEE85807.1| predicted protein [Populus trichocarpa] Length = 340 Score = 66.6 bits (161), Expect = 2e-09 Identities = 37/95 (38%), Positives = 54/95 (56%) Frame = +2 Query: 2 EKQNFLDLQEHDEDGNFITDPISWLSEDHTXXXXXXXXXXXXXXXXXXXXXFDRFIYKNL 181 E Q F+DLQ++ + DP SWLSED DR ++ +L Sbjct: 3 EAQRFVDLQQNSSN---FGDPKSWLSEDSNSNSSPTHHPNHSQLASSAGGNVDRVLFNDL 59 Query: 182 VEMVPLIETLMDRKANNSSSFTRRATMVCTKTPTK 286 VEMVPL+++L+DRK S+SFTRR +++ TKTP++ Sbjct: 60 VEMVPLVQSLIDRKV--STSFTRRGSVIYTKTPSR 92 >ref|XP_003524494.1| PREDICTED: uncharacterized protein LOC100799930 [Glycine max] Length = 327 Score = 58.2 bits (139), Expect = 7e-07 Identities = 37/93 (39%), Positives = 52/93 (55%) Frame = +2 Query: 8 QNFLDLQEHDEDGNFITDPISWLSEDHTXXXXXXXXXXXXXXXXXXXXXFDRFIYKNLVE 187 Q+F+DLQE+ E G + SWLS DR ++ +LVE Sbjct: 2 QHFVDLQENSELG----ESNSWLSAKEQSGAAPNTN-------------LDRVLFNDLVE 44 Query: 188 MVPLIETLMDRKANNSSSFTRRATMVCTKTPTK 286 +VPL+++L+DRKA S SFTRR +M+ TKTPT+ Sbjct: 45 IVPLVQSLIDRKA--SRSFTRRGSMIYTKTPTR 75 >ref|XP_002514605.1| conserved hypothetical protein [Ricinus communis] gi|223546209|gb|EEF47711.1| conserved hypothetical protein [Ricinus communis] Length = 367 Score = 57.4 bits (137), Expect = 1e-06 Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 4/97 (4%) Frame = +2 Query: 8 QNFLDLQEHDEDGNFITDPISWLSED----HTXXXXXXXXXXXXXXXXXXXXXFDRFIYK 175 Q+F+DLQE+ G D SWL +D + D ++ Sbjct: 6 QHFVDLQENSSFG----DTKSWLLDDDDKNNNSSPTLRLTHSNSASTAGTTGNIDPVLFN 61 Query: 176 NLVEMVPLIETLMDRKANNSSSFTRRATMVCTKTPTK 286 N+VEMVPLIE+L+ RK N SSFTRR +M+ TKTP++ Sbjct: 62 NIVEMVPLIESLIHRKGN--SSFTRRGSMIYTKTPSR 96 >ref|XP_003549581.1| PREDICTED: uncharacterized protein LOC100806411 [Glycine max] Length = 327 Score = 55.8 bits (133), Expect = 4e-06 Identities = 36/93 (38%), Positives = 51/93 (54%) Frame = +2 Query: 8 QNFLDLQEHDEDGNFITDPISWLSEDHTXXXXXXXXXXXXXXXXXXXXXFDRFIYKNLVE 187 Q+F+DLQ + E G + SWLS DR ++ +LVE Sbjct: 2 QHFMDLQANSELG----ESNSWLSVKEQSGAAPNTN-------------LDRVLFNDLVE 44 Query: 188 MVPLIETLMDRKANNSSSFTRRATMVCTKTPTK 286 +VPL+++L+DRKA S SFTRR +M+ TKTPT+ Sbjct: 45 IVPLVQSLIDRKA--SRSFTRRGSMIYTKTPTR 75 >ref|XP_002273093.1| PREDICTED: uncharacterized protein LOC100247402 [Vitis vinifera] gi|297734104|emb|CBI15351.3| unnamed protein product [Vitis vinifera] Length = 368 Score = 55.8 bits (133), Expect = 4e-06 Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 2/97 (2%) Frame = +2 Query: 2 EKQNFLDLQEHDEDGNFITDPISWLSEDH--TXXXXXXXXXXXXXXXXXXXXXFDRFIYK 175 E Q+F+DL ++ G DP SWLS D + DR ++ Sbjct: 3 EPQHFMDLHDNSSLG----DPKSWLSGDDNSSPIHRRTQSSLSSASAAGTAANVDRLLFN 58 Query: 176 NLVEMVPLIETLMDRKANNSSSFTRRATMVCTKTPTK 286 +LVE+VPL+++L+DRKA SSSFTR + TKTP++ Sbjct: 59 DLVEIVPLVQSLIDRKA--SSSFTRVGAVTYTKTPSR 93