BLASTX nr result

ID: Coptis23_contig00035342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035342
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305296.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_003524494.1| PREDICTED: uncharacterized protein LOC100799...    58   7e-07
ref|XP_002514605.1| conserved hypothetical protein [Ricinus comm...    57   1e-06
ref|XP_003549581.1| PREDICTED: uncharacterized protein LOC100806...    56   4e-06
ref|XP_002273093.1| PREDICTED: uncharacterized protein LOC100247...    56   4e-06

>ref|XP_002305296.1| predicted protein [Populus trichocarpa] gi|222848260|gb|EEE85807.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/95 (38%), Positives = 54/95 (56%)
 Frame = +2

Query: 2   EKQNFLDLQEHDEDGNFITDPISWLSEDHTXXXXXXXXXXXXXXXXXXXXXFDRFIYKNL 181
           E Q F+DLQ++  +     DP SWLSED                        DR ++ +L
Sbjct: 3   EAQRFVDLQQNSSN---FGDPKSWLSEDSNSNSSPTHHPNHSQLASSAGGNVDRVLFNDL 59

Query: 182 VEMVPLIETLMDRKANNSSSFTRRATMVCTKTPTK 286
           VEMVPL+++L+DRK   S+SFTRR +++ TKTP++
Sbjct: 60  VEMVPLVQSLIDRKV--STSFTRRGSVIYTKTPSR 92


>ref|XP_003524494.1| PREDICTED: uncharacterized protein LOC100799930 [Glycine max]
          Length = 327

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 37/93 (39%), Positives = 52/93 (55%)
 Frame = +2

Query: 8   QNFLDLQEHDEDGNFITDPISWLSEDHTXXXXXXXXXXXXXXXXXXXXXFDRFIYKNLVE 187
           Q+F+DLQE+ E G    +  SWLS                          DR ++ +LVE
Sbjct: 2   QHFVDLQENSELG----ESNSWLSAKEQSGAAPNTN-------------LDRVLFNDLVE 44

Query: 188 MVPLIETLMDRKANNSSSFTRRATMVCTKTPTK 286
           +VPL+++L+DRKA  S SFTRR +M+ TKTPT+
Sbjct: 45  IVPLVQSLIDRKA--SRSFTRRGSMIYTKTPTR 75


>ref|XP_002514605.1| conserved hypothetical protein [Ricinus communis]
           gi|223546209|gb|EEF47711.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 367

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
 Frame = +2

Query: 8   QNFLDLQEHDEDGNFITDPISWLSED----HTXXXXXXXXXXXXXXXXXXXXXFDRFIYK 175
           Q+F+DLQE+   G    D  SWL +D    +                       D  ++ 
Sbjct: 6   QHFVDLQENSSFG----DTKSWLLDDDDKNNNSSPTLRLTHSNSASTAGTTGNIDPVLFN 61

Query: 176 NLVEMVPLIETLMDRKANNSSSFTRRATMVCTKTPTK 286
           N+VEMVPLIE+L+ RK N  SSFTRR +M+ TKTP++
Sbjct: 62  NIVEMVPLIESLIHRKGN--SSFTRRGSMIYTKTPSR 96


>ref|XP_003549581.1| PREDICTED: uncharacterized protein LOC100806411 [Glycine max]
          Length = 327

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 36/93 (38%), Positives = 51/93 (54%)
 Frame = +2

Query: 8   QNFLDLQEHDEDGNFITDPISWLSEDHTXXXXXXXXXXXXXXXXXXXXXFDRFIYKNLVE 187
           Q+F+DLQ + E G    +  SWLS                          DR ++ +LVE
Sbjct: 2   QHFMDLQANSELG----ESNSWLSVKEQSGAAPNTN-------------LDRVLFNDLVE 44

Query: 188 MVPLIETLMDRKANNSSSFTRRATMVCTKTPTK 286
           +VPL+++L+DRKA  S SFTRR +M+ TKTPT+
Sbjct: 45  IVPLVQSLIDRKA--SRSFTRRGSMIYTKTPTR 75


>ref|XP_002273093.1| PREDICTED: uncharacterized protein LOC100247402 [Vitis vinifera]
           gi|297734104|emb|CBI15351.3| unnamed protein product
           [Vitis vinifera]
          Length = 368

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
 Frame = +2

Query: 2   EKQNFLDLQEHDEDGNFITDPISWLSEDH--TXXXXXXXXXXXXXXXXXXXXXFDRFIYK 175
           E Q+F+DL ++   G    DP SWLS D   +                      DR ++ 
Sbjct: 3   EPQHFMDLHDNSSLG----DPKSWLSGDDNSSPIHRRTQSSLSSASAAGTAANVDRLLFN 58

Query: 176 NLVEMVPLIETLMDRKANNSSSFTRRATMVCTKTPTK 286
           +LVE+VPL+++L+DRKA  SSSFTR   +  TKTP++
Sbjct: 59  DLVEIVPLVQSLIDRKA--SSSFTRVGAVTYTKTPSR 93


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