BLASTX nr result

ID: Coptis23_contig00035330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035330
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312805.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]    58   7e-07
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]    58   7e-07
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]    58   7e-07
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]    58   7e-07

>ref|XP_002312805.1| predicted protein [Populus trichocarpa] gi|222849213|gb|EEE86760.1|
           predicted protein [Populus trichocarpa]
          Length = 104

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/42 (57%), Positives = 32/42 (76%)
 Frame = +3

Query: 111 LTNFNYVQTLIPIFDGESYDFWSLQMRTLFIPQDLWELVEDG 236
           ++ F+Y  T IPIFDG  Y++WS QM T+FI QDLW LV++G
Sbjct: 7   ISTFSYTTTQIPIFDGYHYEYWSSQMETIFISQDLWTLVDEG 48


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/36 (66%), Positives = 30/36 (83%)
 Frame = +3

Query: 132 QTLIPIFDGESYDFWSLQMRTLFIPQDLWELVEDGY 239
           Q  IPIF GE Y+FWS++M+TLF  QDLW+LVE+GY
Sbjct: 13  QPAIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGY 48


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/36 (66%), Positives = 30/36 (83%)
 Frame = +3

Query: 132 QTLIPIFDGESYDFWSLQMRTLFIPQDLWELVEDGY 239
           Q  IPIF GE Y+FWS++M+TLF  QDLW+LVE+GY
Sbjct: 13  QPAIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGY 48


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/36 (66%), Positives = 30/36 (83%)
 Frame = +3

Query: 132 QTLIPIFDGESYDFWSLQMRTLFIPQDLWELVEDGY 239
           Q  IPIF GE Y+FWS++M+TLF  QDLW+LVE+GY
Sbjct: 13  QPTIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGY 48


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/36 (66%), Positives = 30/36 (83%)
 Frame = +3

Query: 132 QTLIPIFDGESYDFWSLQMRTLFIPQDLWELVEDGY 239
           Q  IPIF GE Y+FWS++M+TLF  QDLW+LVE+GY
Sbjct: 13  QPAIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGY 48


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