BLASTX nr result

ID: Coptis23_contig00035328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035328
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303718.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002299383.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_003534856.1| PREDICTED: uncharacterized protein LOC100796...    64   1e-08
ref|XP_003547403.1| PREDICTED: uncharacterized protein LOC100796...    64   2e-08
gb|ABK92731.1| unknown [Populus trichocarpa]                           64   2e-08

>ref|XP_002303718.1| predicted protein [Populus trichocarpa] gi|222841150|gb|EEE78697.1|
           predicted protein [Populus trichocarpa]
          Length = 816

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/45 (73%), Positives = 39/45 (86%), Gaps = 1/45 (2%)
 Frame = -3

Query: 259 EMELIYDLKGHMERLQYEMYEIRKSIQSCVGMQVNLQNSIK-QEV 128
           EMEL+YDLKGHME+LQ EM E+RKSIQSC+ MQ+N QN +K QEV
Sbjct: 700 EMELLYDLKGHMEQLQREMSELRKSIQSCMEMQMNSQNYLKVQEV 744


>ref|XP_002299383.1| predicted protein [Populus trichocarpa] gi|222846641|gb|EEE84188.1|
           predicted protein [Populus trichocarpa]
          Length = 923

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/41 (73%), Positives = 36/41 (87%)
 Frame = -3

Query: 259 EMELIYDLKGHMERLQYEMYEIRKSIQSCVGMQVNLQNSIK 137
           EME +YDLKGHME+LQ EM E+RK+IQSC+ MQ+NLQNS K
Sbjct: 810 EMEFVYDLKGHMEQLQREMSELRKAIQSCMEMQMNLQNSWK 850


>ref|XP_003534856.1| PREDICTED: uncharacterized protein LOC100796661 [Glycine max]
          Length = 920

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/54 (59%), Positives = 39/54 (72%)
 Frame = -3

Query: 259 EMELIYDLKGHMERLQYEMYEIRKSIQSCVGMQVNLQNSIKQEVAAAVCRTSKS 98
           EMELIYDL+GHME+L  E+ E+RKSI+ C+ MQ+ LQ SIKQEV        KS
Sbjct: 805 EMELIYDLRGHMEQLYSEISELRKSIKGCLEMQMELQQSIKQEVQTVKKEEKKS 858


>ref|XP_003547403.1| PREDICTED: uncharacterized protein LOC100796627 [Glycine max]
          Length = 917

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/56 (57%), Positives = 39/56 (69%)
 Frame = -3

Query: 259 EMELIYDLKGHMERLQYEMYEIRKSIQSCVGMQVNLQNSIKQEVAAAVCRTSKS*N 92
           EMELIYDL+GHME L  E+ E+RKSI+ C+ MQ+ LQ S+KQEV        KS N
Sbjct: 802 EMELIYDLRGHMELLYNEISELRKSIKGCMEMQIELQQSMKQEVQTVKKEEKKSNN 857


>gb|ABK92731.1| unknown [Populus trichocarpa]
          Length = 116

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/44 (72%), Positives = 38/44 (86%), Gaps = 1/44 (2%)
 Frame = -3

Query: 256 MELIYDLKGHMERLQYEMYEIRKSIQSCVGMQVNLQNSIK-QEV 128
           MEL+YDLKGHME+LQ EM E+RKSIQSC+ MQ+N QN +K QEV
Sbjct: 1   MELLYDLKGHMEQLQREMSELRKSIQSCMEMQMNSQNYLKVQEV 44


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