BLASTX nr result

ID: Coptis23_contig00035311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035311
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|2...    95   8e-18
ref|XP_002333768.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002310986.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
ref|XP_002327345.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
ref|XP_002327346.1| predicted protein [Populus trichocarpa] gi|2...    82   7e-14

>ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|222850807|gb|EEE88354.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 60/149 (40%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
 Frame = -1

Query: 472 DDILVEIMCRLPE-KDIIRFKSVSKSFNRLISHVVLPRIQ--SALYGLFVHTAHFGAKCP 302
           DD+LVEI+CR+ + K +IR KSV KS+N LI+   +P+I   S L+G        G   P
Sbjct: 27  DDVLVEILCRVTDRKHLIRLKSVCKSWNNLITDACVPKISASSPLHGFIYLAKKIGFGKP 86

Query: 301 DGPWDFSFMNGRNYSLVDPSFFVHPSFPNLPFTPVPKKFLDCCNGFLLFFDPLSLQFFLC 122
               D+           +P  FV      LPF P    FLDCCNG LLF +  +LQ+++C
Sbjct: 87  Y--IDYIPCAITPAVAPEPHEFVKSYSSLLPFEPARGDFLDCCNGLLLFVEGCTLQYYVC 144

Query: 121 NPCTEQCVAIPYHKKRKHCRVACLAFENS 35
           NP T+ CVAIP     ++   A LAF+ S
Sbjct: 145 NPATKHCVAIPRDFMLENIIFAALAFDPS 173


>ref|XP_002333768.1| predicted protein [Populus trichocarpa] gi|222838455|gb|EEE76820.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
 Frame = -1

Query: 472 DDILVEIMCRLPE-KDIIRFKSVSKSFNRLISHVVLPRIQ--SALYGLFVHTAHFGAKCP 302
           DD+LVEI+CR+ + K +IR KSV K +N LI+   +P+I   S L+G   H     ++  
Sbjct: 27  DDVLVEILCRVTDGKHLIRLKSVCKCWNNLITDACVPKISASSPLHGFIYHALRVSSR-- 84

Query: 301 DGPWDFSFMNGRNYSLVDPSFFVHPSFPNLPFTPVPKKFLDCCNGFLLFFDPLSLQFFLC 122
               D+           +P  FV      LPF      FLDCCNG LLF +    ++++C
Sbjct: 85  KTYIDYIPCAMTPAVAPEPHEFVKSYSSLLPFDLARGDFLDCCNGLLLFVEGPIPRYYVC 144

Query: 121 NPCTEQCVAIPYHKKRKHCRVACLAFE 41
           NP T+QCVAIP     ++   A LAF+
Sbjct: 145 NPVTKQCVAIPRDFTLENICTASLAFD 171


>ref|XP_002310986.1| predicted protein [Populus trichocarpa] gi|222850806|gb|EEE88353.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 57/160 (35%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
 Frame = -1

Query: 496 NCGDTVLFDDILVEIMCRLPE-KDIIRFKSVSKSFNRLISHVVLPRIQ--SALYGLFVHT 326
           +C  + L DD+LVEI+CR+ + K +IR KSV K +N LI     P+I   S L G   H 
Sbjct: 19  SCFCSSLPDDVLVEILCRVTDRKHLIRLKSVCKCWNNLI-----PKISDSSPLRGFIYHA 73

Query: 325 AHFGAKCPDGPWDFSFMNGRNYSLV-----DPSFFVHPSFPNLPFTPVPKKFLDCCNGFL 161
               ++        ++++   Y+L      +P  F+      LPF      FLDCCNG L
Sbjct: 74  LRVSSR-------ETYIDYIPYALTPTVAPEPHEFIKSYSSLLPFDLARGDFLDCCNGLL 126

Query: 160 LFFDPLSLQFFLCNPCTEQCVAIPYHKKRKHCRVACLAFE 41
           LF +    ++++CNP T+QCVAIP     ++   A LAF+
Sbjct: 127 LFVEGPIPRYYVCNPVTKQCVAIPRDFTLENICTASLAFD 166


>ref|XP_002327345.1| predicted protein [Populus trichocarpa] gi|222835715|gb|EEE74150.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 59/173 (34%), Positives = 83/173 (47%), Gaps = 20/173 (11%)
 Frame = -1

Query: 472 DDILVEIMCRLPEKDIIRFKSVSKSFNRLISHVVLPRIQSALYGLFVHTAHFGAKCPDGP 293
           DD++VEI+CRLP K ++R K VSK+++RLIS+V  P   +A      H + F   C    
Sbjct: 7   DDMIVEILCRLPVKVVMRLKVVSKAWHRLISNVCAPLFSAA---AAAHPSGFLFLC---- 59

Query: 292 WDFSFMNGRNYSLVDPSF------------FVHPSFPNLPFTPVPKKFLDCCNGFLLFF- 152
             F  + G  Y     S+            FV      LPF      + DCCNG LLF  
Sbjct: 60  -SFQIIGGLGYFAAYASYPDVRDCVGQTDGFVDSYACMLPFMLSSDHYFDCCNGLLLFVR 118

Query: 151 ----DPLSLQFFLCNPCTEQCVAIPYHKKRKHCRVACLAFE---NSNFYVVHF 14
               + L   +F+CN  T QCVAIP  + R     A +A++   + ++ VV F
Sbjct: 119 REQREALPHYYFVCNTTTRQCVAIPNPRPRTAPFAAAIAYDPAKSPHYKVVRF 171


>ref|XP_002327346.1| predicted protein [Populus trichocarpa] gi|222835716|gb|EEE74151.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 58/175 (33%), Positives = 84/175 (48%), Gaps = 20/175 (11%)
 Frame = -1

Query: 478 LFDDILVEIMCRLPEKDIIRFKSVSKSFNRLISHVVLPRIQSALYGLFVHTAHFGAKCPD 299
           L DD+++EI+CRLP K ++R  +VSK+++RLIS+V  P   +A      H + F   C  
Sbjct: 5   LSDDMIIEILCRLPVKMVMRLNAVSKAWHRLISNVCAPLFSAA---AAAHPSGFLFLC-- 59

Query: 298 GPWDFSFMNGRNYSLVDPSF------------FVHPSFPNLPFTPVPKKFLDCCNGFLLF 155
               F  + G  Y     S+            FV      LPF      + DCCNG LLF
Sbjct: 60  ---SFQIIGGLGYFAAYASYPDVRDCVGQTDGFVDSYACMLPFMLSSDHYFDCCNGLLLF 116

Query: 154 F-----DPLSLQFFLCNPCTEQCVAIPYHKKRKHCRVACLAFE---NSNFYVVHF 14
                 + L   +F+CN  T QCVAIP  + R     A +A++   + ++ VV F
Sbjct: 117 VRREQREALPHYYFVCNTTTRQCVAIPNPRPRTAPFAAAIAYDPAKSPHYKVVRF 171


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