BLASTX nr result

ID: Coptis23_contig00035301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035301
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK49563.1| unknown [Lotus japonicus]                               63   7e-11
ref|XP_004135776.1| PREDICTED: uncharacterized protein LOC101207...    63   8e-11
ref|XP_004144773.1| PREDICTED: 60S ribosomal protein L18-3-like ...    63   2e-10
ref|XP_003556523.1| PREDICTED: 60S ribosomal protein L18-3-like ...    63   2e-10
ref|NP_001236071.1| uncharacterized protein LOC100499789 [Glycin...    63   2e-10

>gb|AFK49563.1| unknown [Lotus japonicus]
          Length = 187

 Score = 63.2 bits (152), Expect(2) = 7e-11
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = -3

Query: 122 DVYLKLLVKLYNFFVRRTGSNFNVVILKRLFVSKV 18
           D+YLKLLVKLY F VRRTGSNFN VILKRLF+SKV
Sbjct: 23  DIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKV 57



 Score = 28.5 bits (62), Expect(2) = 7e-11
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = -2

Query: 186 AGRKSKKTKRIAPK 145
           AG KSKKTKRIAPK
Sbjct: 7   AGGKSKKTKRIAPK 20


>ref|XP_004135776.1| PREDICTED: uncharacterized protein LOC101207642 [Cucumis sativus]
           gi|449524956|ref|XP_004169487.1| PREDICTED:
           uncharacterized protein LOC101228164 [Cucumis sativus]
          Length = 389

 Score = 63.2 bits (152), Expect(2) = 8e-11
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = -3

Query: 122 DVYLKLLVKLYNFFVRRTGSNFNVVILKRLFVSKV 18
           D+YLKLLVKLY F VRRTGSNFN VILKRLF+SKV
Sbjct: 225 DIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKV 259



 Score = 28.1 bits (61), Expect(2) = 8e-11
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -2

Query: 186 AGRKSKKTKRIAPK 145
           AG KSKKTKR+APK
Sbjct: 209 AGGKSKKTKRVAPK 222


>ref|XP_004144773.1| PREDICTED: 60S ribosomal protein L18-3-like [Cucumis sativus]
           gi|449490874|ref|XP_004158733.1| PREDICTED: 60S
           ribosomal protein L18-3-like [Cucumis sativus]
          Length = 187

 Score = 63.2 bits (152), Expect(2) = 2e-10
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = -3

Query: 122 DVYLKLLVKLYNFFVRRTGSNFNVVILKRLFVSKV 18
           D+YLKLLVKLY F VRRTGSNFN VILKRLF+SKV
Sbjct: 23  DIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKV 57



 Score = 26.6 bits (57), Expect(2) = 2e-10
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = -2

Query: 186 AGRKSKKTKRIAPK 145
           AG KSKKTKR APK
Sbjct: 7   AGGKSKKTKRTAPK 20


>ref|XP_003556523.1| PREDICTED: 60S ribosomal protein L18-3-like [Glycine max]
          Length = 187

 Score = 63.2 bits (152), Expect(2) = 2e-10
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = -3

Query: 122 DVYLKLLVKLYNFFVRRTGSNFNVVILKRLFVSKV 18
           D+YLKLLVKLY F VRRTGSNFN VILKRLF+SKV
Sbjct: 23  DIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKV 57



 Score = 26.6 bits (57), Expect(2) = 2e-10
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = -2

Query: 186 AGRKSKKTKRIAPK 145
           AG KSKKTKR APK
Sbjct: 7   AGGKSKKTKRTAPK 20


>ref|NP_001236071.1| uncharacterized protein LOC100499789 [Glycine max]
           gi|255626631|gb|ACU13660.1| unknown [Glycine max]
          Length = 187

 Score = 63.2 bits (152), Expect(2) = 2e-10
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = -3

Query: 122 DVYLKLLVKLYNFFVRRTGSNFNVVILKRLFVSKV 18
           D+YLKLLVKLY F VRRTGSNFN VILKRLF+SKV
Sbjct: 23  DIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKV 57



 Score = 26.6 bits (57), Expect(2) = 2e-10
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = -2

Query: 186 AGRKSKKTKRIAPK 145
           AG KSKKTKR APK
Sbjct: 7   AGGKSKKTKRTAPK 20


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