BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035293
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                61   1e-07
ref|XP_003611210.1| 60S ribosomal export protein NMD3 [Medicago ...    59   4e-07
emb|CCH50976.1| T4.15 [Malus x robusta]                                59   5e-07
ref|ZP_11072118.1| hypothetical protein B879_04163 [Cecembia lon...    58   7e-07
ref|ZP_11076087.1| hypothetical protein B857_03969 [Bacillus isr...    58   9e-07

>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
 Frame = -2

Query: 341 GNTTGDEVSNEWVRETLRVMPINDIIRECRLRWYGHVHCRPNDAPVKRGK--SIDGTRR- 171
           G+T  D++ NE +RE + V  + D +RE RLRW+GHV  R  DAPV+R +   ++GTRR 
Sbjct: 592 GHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAPVRRCEVMVVEGTRRG 651

Query: 170 RGRSDKVVRNYFKELER 120
           RGR  K    Y++E+ R
Sbjct: 652 RGRPKK----YWEEVIR 664


>ref|XP_003611210.1| 60S ribosomal export protein NMD3 [Medicago truncatula]
           gi|355512545|gb|AES94168.1| 60S ribosomal export protein
           NMD3 [Medicago truncatula]
          Length = 669

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
 Frame = -2

Query: 341 GNTTGDEVSNEWVRETLRVMPINDIIRECRLRWYGHVHCRPNDAPVKRGKSIDGT---RR 171
           G T  D + N  +RE +RV PI + + E RLRW+GHV  RP DA V+R   ++ +   R 
Sbjct: 528 GKTRHDRIRNVTIRERVRVAPIVEKLVENRLRWFGHVERRPVDAVVRRMNQMEESQVKRG 587

Query: 170 RGRSDKVVR-NYFKELERNR*D 108
           RGR  K +R    K+LE N  D
Sbjct: 588 RGRPKKTIRETIIKDLEVNELD 609


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
 Frame = -2

Query: 341  GNTTGDEVSNEWVRETLRVMPINDIIRECRLRWYGHVHCRPNDAPVKR---GKSIDGTRR 171
            G+T  D++ NE +R  + V  I   +RE +LRW+GHV  RP DAP++R   G  + G R 
Sbjct: 884  GHTRKDKIRNEDIRGKVGVAEIQGKMRENQLRWFGHVQRRPTDAPIRRCDYGTEVQGRRG 943

Query: 170  RGRSDKVVRNYF-KELE 123
            RGR  K +     K+LE
Sbjct: 944  RGRPRKTLEETLRKDLE 960


>ref|ZP_11072118.1| hypothetical protein B879_04163 [Cecembia lonarensis LW9]
           gi|405551390|gb|EKB47241.1| hypothetical protein
           B879_04163 [Cecembia lonarensis LW9]
          Length = 133

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
 Frame = -2

Query: 341 GNTTGDEVSNEWVRETLRVMPINDIIRECRLRWYGHVHCRPNDAPVKR---GKSIDGTRR 171
           G+T  D++ NE ++  + V  I   +RE RLRW+GHV  RP DAPV+R   G  + G R 
Sbjct: 31  GHTRKDKIRNEDIQGKVGVAEIEGKMRENRLRWFGHVQRRPTDAPVRRCDYGTEVRGRRG 90

Query: 170 RGRSDKVVRNYF-KELE 123
           RGR  K +     K+LE
Sbjct: 91  RGRPRKTLEETLRKDLE 107


>ref|ZP_11076087.1| hypothetical protein B857_03969 [Bacillus isronensis B3W22]
           gi|405383715|gb|EKB43273.1| hypothetical protein
           B857_03969 [Bacillus isronensis B3W22]
          Length = 109

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
 Frame = -2

Query: 341 GNTTGDEVSNEWVRETLRVMPINDIIRECRLRWYGHVHCRPNDAPVKR---GKSIDGTRR 171
           G+T  D++ NE +R  + V  I   +RE RLRW+GHV   P DAP++R   G  + G R 
Sbjct: 7   GHTRKDKIRNEDIRGKVGVAEIEGKMRENRLRWFGHVQRMPTDAPIRRCDYGTEVQGRRG 66

Query: 170 RGRSDKVVRNYF-KELE 123
           RGR  K +     K+LE
Sbjct: 67  RGRPRKTLEETLRKDLE 83