BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035290
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17585.3| unnamed protein product [Vitis vinifera]              168   5e-40
ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containi...   168   5e-40
ref|XP_002533281.1| pentatricopeptide repeat-containing protein,...   165   3e-39
ref|XP_002327713.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_003611888.1| Pentatricopeptide repeat-containing protein ...   161   5e-38

>emb|CBI17585.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  168 bits (425), Expect = 5e-40
 Identities = 79/126 (62%), Positives = 104/126 (82%)
 Frame = -2

Query: 380 TISRMITMLARYGHVELVDQLIMKVKRERIRLSFSTVRLVIDFYGLSKQPDAALRVFYDI 201
           T+ RM+T+LAR+GHVELV++L++K++RE IRL  ST+RL+IDFYG+S+  DAAL+VF+D 
Sbjct: 383 TVQRMMTLLARHGHVELVEKLLLKIRREEIRLPVSTIRLIIDFYGISRNADAALKVFHDA 442

Query: 200 ETVSGAISKHHQSLLYSSLLRTLVKCKRGSDVMDVLEEMILSGIIPDIQTFSGLMQYFAL 21
           E++ G +SK +  LLYSSLLRTL KC R +D +DVLE+M L GI PD+ TFSGLM +FAL
Sbjct: 443 ESLCGPMSKLYLMLLYSSLLRTLTKCGRSADALDVLEQMFLGGICPDVPTFSGLMYHFAL 502

Query: 20  EGDLKT 3
           EGD KT
Sbjct: 503 EGDFKT 508


>ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Vitis vinifera]
          Length = 660

 Score =  168 bits (425), Expect = 5e-40
 Identities = 79/126 (62%), Positives = 104/126 (82%)
 Frame = -2

Query: 380 TISRMITMLARYGHVELVDQLIMKVKRERIRLSFSTVRLVIDFYGLSKQPDAALRVFYDI 201
           T+ RM+T+LAR+GHVELV++L++K++RE IRL  ST+RL+IDFYG+S+  DAAL+VF+D 
Sbjct: 407 TVQRMMTLLARHGHVELVEKLLLKIRREEIRLPVSTIRLIIDFYGISRNADAALKVFHDA 466

Query: 200 ETVSGAISKHHQSLLYSSLLRTLVKCKRGSDVMDVLEEMILSGIIPDIQTFSGLMQYFAL 21
           E++ G +SK +  LLYSSLLRTL KC R +D +DVLE+M L GI PD+ TFSGLM +FAL
Sbjct: 467 ESLCGPMSKLYLMLLYSSLLRTLTKCGRSADALDVLEQMFLGGICPDVPTFSGLMYHFAL 526

Query: 20  EGDLKT 3
           EGD KT
Sbjct: 527 EGDFKT 532


>ref|XP_002533281.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526906|gb|EEF29113.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 652

 Score =  165 bits (418), Expect = 3e-39
 Identities = 82/126 (65%), Positives = 103/126 (81%)
 Frame = -2

Query: 380 TISRMITMLARYGHVELVDQLIMKVKRERIRLSFSTVRLVIDFYGLSKQPDAALRVFYDI 201
           T+ RM+T+LAR+G VELVD+LI K++ E +RL FST+RL+IDFYG+SK  DAAL+VF D 
Sbjct: 410 TVQRMMTLLARHGKVELVDKLITKIRIEGMRLPFSTIRLIIDFYGISKNADAALKVFRDD 469

Query: 200 ETVSGAISKHHQSLLYSSLLRTLVKCKRGSDVMDVLEEMILSGIIPDIQTFSGLMQYFAL 21
             + G+I+K +  LLYSSLLRTL KC R SD +DVLEEMIL GI PDIQT+SGLM +FAL
Sbjct: 470 RPLCGSITKFNLMLLYSSLLRTLTKCNRNSDAIDVLEEMILCGISPDIQTYSGLMYHFAL 529

Query: 20  EGDLKT 3
           +GD+KT
Sbjct: 530 QGDIKT 535


>ref|XP_002327713.1| predicted protein [Populus trichocarpa] gi|222836798|gb|EEE75191.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  162 bits (409), Expect = 3e-38
 Identities = 80/126 (63%), Positives = 102/126 (80%)
 Frame = -2

Query: 380 TISRMITMLARYGHVELVDQLIMKVKRERIRLSFSTVRLVIDFYGLSKQPDAALRVFYDI 201
           T+ RM+T+LA++G VELVDQLI K++ E +RL FST+RL+IDF G+SK  DAAL+VF + 
Sbjct: 274 TVQRMMTLLAKHGKVELVDQLINKIRSEGMRLPFSTIRLIIDFCGISKNADAALKVFRED 333

Query: 200 ETVSGAISKHHQSLLYSSLLRTLVKCKRGSDVMDVLEEMILSGIIPDIQTFSGLMQYFAL 21
             + G I+K++  LLYSSL+RTL KCKR SD +DVLEEMIL GI PDIQTFSGLM +FA 
Sbjct: 334 RALCGPITKYNLMLLYSSLIRTLTKCKRDSDAIDVLEEMILCGICPDIQTFSGLMYHFAS 393

Query: 20  EGDLKT 3
           +GD+KT
Sbjct: 394 QGDIKT 399


>ref|XP_003611888.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513223|gb|AES94846.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 659

 Score =  161 bits (408), Expect = 5e-38
 Identities = 79/126 (62%), Positives = 104/126 (82%)
 Frame = -2

Query: 380 TISRMITMLARYGHVELVDQLIMKVKRERIRLSFSTVRLVIDFYGLSKQPDAALRVFYDI 201
           T+ R++T+LAR+G  ELVD+LI+K++ E +RL FST+RL+IDFYG+SK  DAAL+VF D 
Sbjct: 417 TVQRIMTLLARHGRTELVDRLILKIRIEGMRLPFSTIRLIIDFYGISKNADAALKVFNDD 476

Query: 200 ETVSGAISKHHQSLLYSSLLRTLVKCKRGSDVMDVLEEMILSGIIPDIQTFSGLMQYFAL 21
           + + G+ISK +  LLYSSLLRTL KC R S+ +D+L+EMIL+GI PDIQTFSGLMQYF+ 
Sbjct: 477 QILCGSISKVNLMLLYSSLLRTLTKCGRNSNTLDMLDEMILNGICPDIQTFSGLMQYFSQ 536

Query: 20  EGDLKT 3
            GD+KT
Sbjct: 537 LGDIKT 542