BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035277
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like...    82   6e-14
ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 fing...    82   6e-14
ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...    82   6e-14
emb|CBI36629.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vit...    80   2e-13

>ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like [Glycine max]
          Length = 522

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/59 (67%), Positives = 47/59 (79%)
 Frame = -2

Query: 181 HLLVRFLFRPSTRDPEDIDNVTAXXXXXXXXXXXHDSGVDQSYIDTLPVFLYKAIIGLK 5
           HLLVRFL+RP TR+P+++DNVTA           HD+GVDQS+IDTLPVFLYKAIIGLK
Sbjct: 62  HLLVRFLWRPQTREPDELDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLK 120


>ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL13-like,
           partial [Glycine max]
          Length = 524

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/59 (67%), Positives = 47/59 (79%)
 Frame = -2

Query: 181 HLLVRFLFRPSTRDPEDIDNVTAXXXXXXXXXXXHDSGVDQSYIDTLPVFLYKAIIGLK 5
           HLLVRFL+RP TR+P+++DNVTA           HD+GVDQS+IDTLPVFLYKAIIGLK
Sbjct: 70  HLLVRFLWRPQTREPDELDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLK 128


>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/60 (68%), Positives = 45/60 (75%)
 Frame = -2

Query: 181 HLLVRFLFRPSTRDPEDIDNVTAXXXXXXXXXXXHDSGVDQSYIDTLPVFLYKAIIGLKN 2
           HLLVRFL RP  RDP+D+DNVTA           HD+GVDQS+IDTLPVF YKAIIGLKN
Sbjct: 71  HLLVRFLLRPPNRDPDDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFHYKAIIGLKN 130


>emb|CBI36629.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 56/140 (40%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
 Frame = -2

Query: 412 RLETLVSVL*LLF*NMDWVLFQSKVQDYIXXXXXXXXXXXXXXXXXLQADNSFN---KXX 242
           ++  LVS L L F NMD VLFQ + + +                        +N   K  
Sbjct: 31  KVAVLVSFLHLSFENMDSVLFQIQEKAFNSPSESPAFLSQSPPPPANFQSGDYNLNSKVS 90

Query: 241 XXXXXXXXXXXXXXXXXXXLHLLVRFLFRPSTRDPEDIDNVTAXXXXXXXXXXXHDSGVD 62
                              LHLLVRFL R   R+PED+DNVTA           HD+GVD
Sbjct: 91  PSILLIIIILAIIFFVSGLLHLLVRFLLRQPNREPEDLDNVTALQGQLQQLFHLHDAGVD 150

Query: 61  QSYIDTLPVFLYKAIIGLKN 2
           QS+IDTLPVFLYKAIIG KN
Sbjct: 151 QSFIDTLPVFLYKAIIGAKN 170


>ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vitis vinifera]
          Length = 543

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 56/140 (40%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
 Frame = -2

Query: 412 RLETLVSVL*LLF*NMDWVLFQSKVQDYIXXXXXXXXXXXXXXXXXLQADNSFN---KXX 242
           ++  LVS L L F NMD VLFQ + + +                        +N   K  
Sbjct: 31  KVAVLVSFLHLSFENMDSVLFQIQEKAFNSPSESPAFLSQSPPPPANFQSGDYNLNSKVS 90

Query: 241 XXXXXXXXXXXXXXXXXXXLHLLVRFLFRPSTRDPEDIDNVTAXXXXXXXXXXXHDSGVD 62
                              LHLLVRFL R   R+PED+DNVTA           HD+GVD
Sbjct: 91  PSILLIIIILAIIFFVSGLLHLLVRFLLRQPNREPEDLDNVTALQGQLQQLFHLHDAGVD 150

Query: 61  QSYIDTLPVFLYKAIIGLKN 2
           QS+IDTLPVFLYKAIIG KN
Sbjct: 151 QSFIDTLPVFLYKAIIGAKN 170