BLASTX nr result

ID: Coptis23_contig00035273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035273
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332276.1| predicted protein [Populus trichocarpa] gi|2...   174   5e-42
ref|XP_002986413.1| hypothetical protein SELMODRAFT_446593 [Sela...   110   1e-22
ref|XP_002963941.1| hypothetical protein SELMODRAFT_69384 [Selag...   102   2e-20
ref|XP_002961474.1| hypothetical protein SELMODRAFT_76417 [Selag...    94   1e-17
ref|XP_002960616.1| hypothetical protein SELMODRAFT_69812 [Selag...    87   2e-15

>ref|XP_002332276.1| predicted protein [Populus trichocarpa] gi|222832041|gb|EEE70518.1|
           predicted protein [Populus trichocarpa]
          Length = 145

 Score =  174 bits (442), Expect = 5e-42
 Identities = 74/121 (61%), Positives = 88/121 (72%)
 Frame = -1

Query: 439 GAFHCVDAMHSQTSDTPTTHSNFLHAALRGGQKHFWCASNPTVCLDREKNPWGGSTCCFQ 260
           G     D   S   DTPT H NF  +ALRG Q+   CA +P VC+DR KNPWGGSTCCF+
Sbjct: 24  GEVVAADRFGSPEPDTPT-HLNFFRSALRGRQRVLSCADDPRVCVDRGKNPWGGSTCCFR 82

Query: 259 RFCKDTMNDRNHCGRCGMRCAHGLVCCGGRCVDIRNDPHNCGSCYEECPGQVGCSFAMCG 80
           +FCKDT+ D ++CG CG  CA+G VCC G+CVDIRNDP +CGSC++ECPGQ  CSFAMC 
Sbjct: 83  KFCKDTLRDSDNCGACGQTCAYGFVCCDGKCVDIRNDPRHCGSCFQECPGQGRCSFAMCD 142

Query: 79  Y 77
           Y
Sbjct: 143 Y 143


>ref|XP_002986413.1| hypothetical protein SELMODRAFT_446593 [Selaginella moellendorffii]
           gi|300145949|gb|EFJ12622.1| hypothetical protein
           SELMODRAFT_446593 [Selaginella moellendorffii]
          Length = 167

 Score =  110 bits (275), Expect = 1e-22
 Identities = 47/105 (44%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
 Frame = -1

Query: 382 HSNFLHAALRGGQKHF---WCASNPTVCLDREKNPWGGSTCCFQRFCKDTMNDRNHCGRC 212
           HSNFL +    G + +   WCA N +VC D  K P GG+ CC+ RFC DT  D ++CG C
Sbjct: 39  HSNFLRSNYLSGSQQWQFTWCAHNASVCKDPAKFPSGGTKCCWNRFCVDTKVDPSNCGGC 98

Query: 211 GMRCAHGLVCCGGRCVDIRNDPHNCGSCYEECPGQVGCSFAMCGY 77
              C +G  CC G+CVD+  D  +CGSC   C     C F +CGY
Sbjct: 99  NKPCTYGFSCCAGKCVDLLRDRKHCGSCDNICSKHSQCEFGLCGY 143


>ref|XP_002963941.1| hypothetical protein SELMODRAFT_69384 [Selaginella moellendorffii]
           gi|302769117|ref|XP_002967978.1| hypothetical protein
           SELMODRAFT_69385 [Selaginella moellendorffii]
           gi|300164716|gb|EFJ31325.1| hypothetical protein
           SELMODRAFT_69385 [Selaginella moellendorffii]
           gi|300167670|gb|EFJ34274.1| hypothetical protein
           SELMODRAFT_69384 [Selaginella moellendorffii]
          Length = 85

 Score =  102 bits (255), Expect = 2e-20
 Identities = 39/85 (45%), Positives = 49/85 (57%)
 Frame = -1

Query: 331 CASNPTVCLDREKNPWGGSTCCFQRFCKDTMNDRNHCGRCGMRCAHGLVCCGGRCVDIRN 152
           C +N +VC D  +NP G   CCF   CK T +D N+CG C   C++GL CCGG CVD+  
Sbjct: 1   CHNNASVCSDLSRNPEGPGVCCFNWVCKQTQSDGNNCGACSRACSYGLSCCGGECVDLMT 60

Query: 151 DPHNCGSCYEECPGQVGCSFAMCGY 77
              +CG C   C   V C F +CGY
Sbjct: 61  SSRHCGRCNTSCHRNVACEFGLCGY 85


>ref|XP_002961474.1| hypothetical protein SELMODRAFT_76417 [Selaginella moellendorffii]
           gi|302776316|ref|XP_002971333.1| hypothetical protein
           SELMODRAFT_94795 [Selaginella moellendorffii]
           gi|300161315|gb|EFJ27931.1| hypothetical protein
           SELMODRAFT_94795 [Selaginella moellendorffii]
           gi|300170133|gb|EFJ36734.1| hypothetical protein
           SELMODRAFT_76417 [Selaginella moellendorffii]
          Length = 87

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 40/86 (46%), Positives = 47/86 (54%)
 Frame = -1

Query: 331 CASNPTVCLDREKNPWGGSTCCFQRFCKDTMNDRNHCGRCGMRCAHGLVCCGGRCVDIRN 152
           C+S P +CLD+   P  G  CC    C D   D NHCG C  RC +   CC GRC ++  
Sbjct: 3   CSSKPMICLDKRFKP-AGPICCGW-ICVDVTRDVNHCGHCFHRCKYSRSCCQGRCKNLDR 60

Query: 151 DPHNCGSCYEECPGQVGCSFAMCGYG 74
           D HNCG C   CP +  C F MCGYG
Sbjct: 61  DVHNCGFCGRRCPKRTKCVFGMCGYG 86


>ref|XP_002960616.1| hypothetical protein SELMODRAFT_69812 [Selaginella moellendorffii]
           gi|300171555|gb|EFJ38155.1| hypothetical protein
           SELMODRAFT_69812 [Selaginella moellendorffii]
          Length = 82

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 38/85 (44%), Positives = 47/85 (55%)
 Frame = -1

Query: 331 CASNPTVCLDREKNPWGGSTCCFQRFCKDTMNDRNHCGRCGMRCAHGLVCCGGRCVDIRN 152
           C   P +CLD   NP  G TCC  R C D + +RN+CG C  RC  G  CC GRCV++  
Sbjct: 1   CDRKPAICLDGRYNP-AGPTCC-NRQCVDILTNRNYCGSCWNRCPWGYSCCRGRCVNLLR 58

Query: 151 DPHNCGSCYEECPGQVGCSFAMCGY 77
           D  NCG C   C  +  C + +CGY
Sbjct: 59  DSRNCGKCGRVCKNK-RCDYGLCGY 82


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