BLASTX nr result

ID: Coptis23_contig00035267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035267
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21629.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002273364.1| PREDICTED: uncharacterized protein LOC100262...   170   1e-40
ref|XP_004167205.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   167   1e-39
ref|XP_002307063.1| predicted protein [Populus trichocarpa] gi|2...   164   7e-39
ref|NP_680157.1| uncharacterized protein [Arabidopsis thaliana] ...   162   2e-38

>emb|CBI21629.3| unnamed protein product [Vitis vinifera]
          Length = 712

 Score =  170 bits (430), Expect = 1e-40
 Identities = 80/108 (74%), Positives = 92/108 (85%)
 Frame = +3

Query: 3   KGYWDNLDNMQEEIIRFQRSWGMDLTYMPSRKSFERAGRYDIARALEKWGGLHEVSRLLS 182
           KGYWDNL+N++EEI RFQRSWGMD +YMPSRK+FERAGRYDIARALEKWGGLHEVSRLLS
Sbjct: 594 KGYWDNLENLKEEITRFQRSWGMDPSYMPSRKTFERAGRYDIARALEKWGGLHEVSRLLS 653

Query: 183 LKVRHPNRQANPAREKRSETIEPNDMESDENMTYSNKPYISQDTQKWL 326
           LKVRHPNRQ N  + KRS+ +   DM  DE+ T ++KPY+ QD QKWL
Sbjct: 654 LKVRHPNRQPNLTKHKRSDFVASPDMVVDEDRT-TSKPYVPQDAQKWL 700


>ref|XP_002273364.1| PREDICTED: uncharacterized protein LOC100262883 [Vitis vinifera]
          Length = 735

 Score =  170 bits (430), Expect = 1e-40
 Identities = 80/108 (74%), Positives = 92/108 (85%)
 Frame = +3

Query: 3   KGYWDNLDNMQEEIIRFQRSWGMDLTYMPSRKSFERAGRYDIARALEKWGGLHEVSRLLS 182
           KGYWDNL+N++EEI RFQRSWGMD +YMPSRK+FERAGRYDIARALEKWGGLHEVSRLLS
Sbjct: 617 KGYWDNLENLKEEITRFQRSWGMDPSYMPSRKTFERAGRYDIARALEKWGGLHEVSRLLS 676

Query: 183 LKVRHPNRQANPAREKRSETIEPNDMESDENMTYSNKPYISQDTQKWL 326
           LKVRHPNRQ N  + KRS+ +   DM  DE+ T ++KPY+ QD QKWL
Sbjct: 677 LKVRHPNRQPNLTKHKRSDFVASPDMVVDEDRT-TSKPYVPQDAQKWL 723


>ref|XP_004167205.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101212159
           [Cucumis sativus]
          Length = 727

 Score =  167 bits (422), Expect = 1e-39
 Identities = 78/109 (71%), Positives = 92/109 (84%)
 Frame = +3

Query: 3   KGYWDNLDNMQEEIIRFQRSWGMDLTYMPSRKSFERAGRYDIARALEKWGGLHEVSRLLS 182
           KGYWD  DN+QEEI RFQ+SWGMD +YMPSRKSFERAGRYDIARALEKWGGLHEVSRLLS
Sbjct: 610 KGYWDKFDNLQEEINRFQKSWGMDPSYMPSRKSFERAGRYDIARALEKWGGLHEVSRLLS 669

Query: 183 LKVRHPNRQANPAREKRSETIEPNDMESDENMTYSNKPYISQDTQKWLT 329
           LKVRHPNRQ + A++++S+ +  ND + +      +KPYISQDT+KWLT
Sbjct: 670 LKVRHPNRQPSFAKDRKSDYVVVNDFDGESKA--PSKPYISQDTEKWLT 716


>ref|XP_002307063.1| predicted protein [Populus trichocarpa] gi|222856512|gb|EEE94059.1|
           predicted protein [Populus trichocarpa]
          Length = 727

 Score =  164 bits (415), Expect = 7e-39
 Identities = 77/108 (71%), Positives = 92/108 (85%)
 Frame = +3

Query: 3   KGYWDNLDNMQEEIIRFQRSWGMDLTYMPSRKSFERAGRYDIARALEKWGGLHEVSRLLS 182
           KGYWDNL+N+QEEI RFQRSWGMDL++MPSRKSFERAGRYDIARALEKWGGLHEVSRLL+
Sbjct: 611 KGYWDNLENLQEEISRFQRSWGMDLSFMPSRKSFERAGRYDIARALEKWGGLHEVSRLLA 670

Query: 183 LKVRHPNRQANPAREKRSETIEPNDMESDENMTYSNKPYISQDTQKWL 326
           LKVRHPNRQAN  ++++ + +   D E ++ +    K Y+SQDTQKWL
Sbjct: 671 LKVRHPNRQANSIKDRKIDDVS-TDAEGEDKI--PTKAYVSQDTQKWL 715


>ref|NP_680157.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13548330|emb|CAC35877.1| putative protein
           [Arabidopsis thaliana] gi|26450803|dbj|BAC42510.1|
           unknown protein [Arabidopsis thaliana]
           gi|29029030|gb|AAO64894.1| At5g08720 [Arabidopsis
           thaliana] gi|332003958|gb|AED91341.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 719

 Score =  162 bits (411), Expect = 2e-38
 Identities = 76/110 (69%), Positives = 90/110 (81%), Gaps = 2/110 (1%)
 Frame = +3

Query: 3   KGYWDNLDNMQEEIIRFQRSWGMDLTYMPSRKSFERAGRYDIARALEKWGGLHEVSRLLS 182
           KGYWDNL+N+QEEI RFQ+SWGMD ++MPSRKSFERAGRYDIARALEKWGGLHEVSRLL+
Sbjct: 597 KGYWDNLENLQEEIGRFQQSWGMDPSFMPSRKSFERAGRYDIARALEKWGGLHEVSRLLA 656

Query: 183 LKVRHPNRQANPAREKRSETIEPNDMESDENMTY--SNKPYISQDTQKWL 326
           L VRHPNRQ N  ++  +  +     E+D N T   +NKPY+SQDT+KWL
Sbjct: 657 LNVRHPNRQLNSRKDNGNTILRTESTEADLNSTVNKNNKPYVSQDTEKWL 706


Top