BLASTX nr result

ID: Coptis23_contig00035265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035265
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28324.3| unnamed protein product [Vitis vinifera]              146   2e-33
ref|XP_002274254.1| PREDICTED: putative phagocytic receptor 1b-l...   146   2e-33
ref|NP_198547.3| putative endomembrane protein 70 [Arabidopsis t...   145   4e-33
ref|XP_002952428.1| hypothetical protein VOLCADRAFT_75353 [Volvo...   144   6e-33
ref|XP_002870515.1| transporter [Arabidopsis lyrata subsp. lyrat...   143   1e-32

>emb|CBI28324.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  146 bits (369), Expect = 2e-33
 Identities = 65/89 (73%), Positives = 73/89 (82%)
 Frame = +1

Query: 1   IGFTYFQLSVEDHEWWWSSLLRGGSTSVFMYSYCFIFYGRSSMSGFLQLSFFFGYNACIC 180
           IG TY QLSVEDHEWWW SLLRGGST++FM+ +C  FY RS MSGF+Q SF+FGYNACIC
Sbjct: 548 IGLTYVQLSVEDHEWWWRSLLRGGSTAIFMFGHCIYFYARSRMSGFMQFSFYFGYNACIC 607

Query: 181 YAFFLMLGTIGFYASLLFVRHIYRVVKLE 267
           YA FLMLGTI F ASL+FVR IY  +K E
Sbjct: 608 YAVFLMLGTISFRASLMFVRLIYHAIKSE 636


>ref|XP_002274254.1| PREDICTED: putative phagocytic receptor 1b-like [Vitis vinifera]
          Length = 608

 Score =  146 bits (369), Expect = 2e-33
 Identities = 65/89 (73%), Positives = 73/89 (82%)
 Frame = +1

Query: 1   IGFTYFQLSVEDHEWWWSSLLRGGSTSVFMYSYCFIFYGRSSMSGFLQLSFFFGYNACIC 180
           IG TY QLSVEDHEWWW SLLRGGST++FM+ +C  FY RS MSGF+Q SF+FGYNACIC
Sbjct: 520 IGLTYVQLSVEDHEWWWRSLLRGGSTAIFMFGHCIYFYARSRMSGFMQFSFYFGYNACIC 579

Query: 181 YAFFLMLGTIGFYASLLFVRHIYRVVKLE 267
           YA FLMLGTI F ASL+FVR IY  +K E
Sbjct: 580 YAVFLMLGTISFRASLMFVRLIYHAIKSE 608


>ref|NP_198547.3| putative endomembrane protein 70 [Arabidopsis thaliana]
           gi|9758717|dbj|BAB09103.1| endosomal protein-like
           [Arabidopsis thaliana] gi|110742157|dbj|BAE99006.1|
           multispanning membrane protein - like [Arabidopsis
           thaliana] gi|332006781|gb|AED94164.1| putative
           endomembrane protein 70 [Arabidopsis thaliana]
          Length = 593

 Score =  145 bits (366), Expect = 4e-33
 Identities = 65/90 (72%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   IGFTYFQLSVEDHEWWWSSLLRGGSTSVFMYSYC-FIFYGRSSMSGFLQLSFFFGYNACI 177
           +  TYFQL+ EDHEWWW SLL GGST +F+Y+YC + +Y RS MSGF+Q SFFFGY ACI
Sbjct: 504 VALTYFQLAAEDHEWWWRSLLCGGSTGLFIYAYCLYYYYARSDMSGFMQTSFFFGYMACI 563

Query: 178 CYAFFLMLGTIGFYASLLFVRHIYRVVKLE 267
           CY FFLMLGTIGF ASLLFVRHIYR +K E
Sbjct: 564 CYGFFLMLGTIGFCASLLFVRHIYRSIKCE 593


>ref|XP_002952428.1| hypothetical protein VOLCADRAFT_75353 [Volvox carteri f.
           nagariensis] gi|300262364|gb|EFJ46571.1| hypothetical
           protein VOLCADRAFT_75353 [Volvox carteri f. nagariensis]
          Length = 554

 Score =  144 bits (364), Expect = 6e-33
 Identities = 64/90 (71%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   IGFTYFQLSVEDHEWWWSSLLRGGSTSVFMYSYCFIFYG-RSSMSGFLQLSFFFGYNACI 177
           +  TYFQL+VEDH WWW S L GGST +F+Y YCF +Y  RS MSGF+Q SFFFGYNA +
Sbjct: 465 VALTYFQLAVEDHRWWWRSFLCGGSTGIFVYGYCFYYYYVRSDMSGFMQTSFFFGYNAVV 524

Query: 178 CYAFFLMLGTIGFYASLLFVRHIYRVVKLE 267
           CYAFFLMLGT+GF ASLLFVRHIYR +K E
Sbjct: 525 CYAFFLMLGTVGFRASLLFVRHIYRAIKCE 554


>ref|XP_002870515.1| transporter [Arabidopsis lyrata subsp. lyrata]
           gi|297316351|gb|EFH46774.1| transporter [Arabidopsis
           lyrata subsp. lyrata]
          Length = 593

 Score =  143 bits (361), Expect = 1e-32
 Identities = 64/90 (71%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   IGFTYFQLSVEDHEWWWSSLLRGGSTSVFMYSYC-FIFYGRSSMSGFLQLSFFFGYNACI 177
           +  TYFQL+ EDHEWWW SLL GGST +F+Y+YC + +Y RS MSGF+Q SFFFGY ACI
Sbjct: 504 VALTYFQLAAEDHEWWWRSLLCGGSTGLFIYAYCLYYYYARSDMSGFMQTSFFFGYMACI 563

Query: 178 CYAFFLMLGTIGFYASLLFVRHIYRVVKLE 267
           CY FFLMLG IGF ASLLFVRHIYR +K E
Sbjct: 564 CYGFFLMLGAIGFRASLLFVRHIYRSIKCE 593


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